Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0384 ATGGATGTAGTGAATCATGAAGCTATGAAATCATCAAAATTATTATCTTCTGAACAAGAAATGTCCAGAGAAGAAGTAAGAGCAAAAATGGTTCTAGATGACCCATCATTATTGAAAGACAACACTGACGTTGAGCTAACCAAAATCCATCTCATGAGAGCCTTTGTAGAGAGCCGTGATCCCTCTTCTAAGGAAGTAGATGATTTAACCCTTAGAAGATTCTTGTGTGCTCGTGATTTCGATGTCGAGAAGGGTTCAGCAATGTTCCTCAAGTACATGAAATGGAGACATTCTTTTGTGCCAAATGGTTTTATATCTCCTTCAGAAATTTCCGATGAACTATCACAGGGGAAGATGTTTGTGCAAGGACTCGATAAGAACAATCGACCTATAACTGTTGTCTTCGCAGCAAAACATTTTCAAAACAAAGATTCTCCAGACACATTCAAAGGGTTTGTAGTTTATGCTCTTGATAAACTATGTTCAAGGATGCCACCTGGGCAAGAAAAGTTTCTAGCTATAGCAGATATTAAGGGTTGGGGATATGCAAATAGTGACATTAGTGGATACCTTAAAGCCCTTACAATTTTGCAGGAATATCACCCAGAAAGATTGGGAAAATTGTTTATTGTTCATGCACCTTACATGTTTATGAAAGTATGGAAAGTTATATACCCTTTGATTGACAACAATACAAGGAAAAAGATGGTATTTGTGGAGAACAAAAACCTGAAAGAAACACTTGTACAAGACATAGATGAGAGTCAGCTTCCTGAAATATATGGAGGCCAAATGCCATTAGTCCCTCTCCAAGATTGTTAA 822 0.3735 MDVVNHEAMKSSKLLSSEQEMSREEVRAKMVLDDPSLLKDNTDVELTKIHLMRAFVESRDPSSKEVDDLTLRRFLCARDFDVEKGSAMFLKYMKWRHSFVPNGFISPSEISDELSQGKMFVQGLDKNNRPITVVFAAKHFQNKDSPDTFKGFVVYALDKLCSRMPPGQEKFLAIADIKGWGYANSDISGYLKALTILQEYHPERLGKLFIVHAPYMFMKVWKVIYPLIDNNTRKKMVFVENKNLKETLVQDIDESQLPEIYGGQMPLVPLQDC* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0384 273 SUPERFAMILY CRAL/TRIO domain 108 266 IPR036865 -
Lan14g0384 273 SUPERFAMILY CRAL/TRIO N-terminal domain 37 104 IPR036273 -
Lan14g0384 273 SMART sec14_4 113 266 IPR001251 -
Lan14g0384 273 CDD SEC14 120 264 IPR001251 -
Lan14g0384 273 MobiDBLite consensus disorder prediction 1 20 - -
Lan14g0384 273 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 107 269 IPR001251 -
Lan14g0384 273 SMART CRAL_TRIO_N_2 67 92 IPR011074 -
Lan14g0384 273 Pfam CRAL/TRIO domain 115 263 IPR001251 -
Lan14g0384 273 PANTHER OS03G0850700 PROTEIN 34 273 - -
Lan14g0384 273 PANTHER POLYPHOSPHOINOSITIDE-BINDING PROTEIN 34 273 - -
Lan14g0384 273 Gene3D - 2 270 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0384 Lan-Chr14 8384381 8386967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0384 71 258 Acyl Lipid Metabolism Gene Families AT5G47730 24.510 1.20e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0384 - - gmx:100797666 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0472 15 11066980 11069194 Lan14g0384 14 8384381 8386967 LSH
Lan12g0734 12 14559253 14561629 Lan14g0384 14 8384381 8386967 PCT
Lan14g0384 14 8384381 8386967 Lan12g0734 12 14559253 14561629 PCT