Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0229 ATGGCTTGTGTGAAATTGGGTTCCAAAGCTGATGCATTCCAGCGTCAAGGGCAGGCCTGGTTCTGCACAACCGGGCTTCCCAGTGATTTAGTTGTTGAAGTTGGCGAGATGTCCTTTCATCTTCACAAGTTCCCTTTGCTATCGAGAAGTGGTGTTTTGTTCAGATTGATTACTGAAGCTTCGGAATCAGAGGAAGAGGAAGAATGTGTCATACACCCCCCGGATATTCCTGGCGGGGCCAAAACCTTTGAACTTGTGGCAAAATTCTGCTATGGCGTGAAACTTGAACTTACCGCATCAAATGTTGTGTACCTCTGGTGTGCTGCTGAGCATCTTGAAATGACTGAGGAACATGGTGAAGGCAATCTTATTTCACAAGCTGAAACCTTTTTCAACCAAGTTGTCCTCCGAAGTTGGAAAGACTCTCTAAGGGCACTTCAAACCTGTGATGATGTACTTTCCCATGCTGAAACGCTTCACATTGTGAAAAGGTGCATTGAATCACTTGCAGCAAAGGCATCTACTGACCCAAATTTGTTCGGATGGCCTGTACTGGAGCGTGGTGGGCCTATGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAGAATTCAAGTTCAGATTGGTGGTATGAGGATGTAGCAACTTTGAGTTTACCTCTTTATAAGAGGTTGGTAGCTGTCATGGAATCTCGGGGCATTAGGCAGGATATTATTGCCGGTTCTCTTGCTTTCTATGCTAAAAGGTATTTACCAGGGTTAAATCGACGCCATGTTTCTGGTGAGTCTAATACCCATCTTACATCAGTCACTTTGGGGTCTCCACCATCTGAAGATGACCAGAAGGTTCTCGTGGAGGAGATTGATAGGTTACTTCCTATGGAAAAGGGCCTGGTCCAGACAAAGTTCTTGTTTGGTCTACTTCGAACAGCCATGATTCTTCGAGTAAGCCAATCTTGCATGTCAAATTTGGAGAAACGGATCGGGATGCAACTTGATCAAGCTACTTTGGAAGATCTCTTGATGCCTACTTTCTCATATTCAATGGAGACACTTTACAACGTTGACTGTGTGCAAAGAATTCTTGATCATTTCCTTGCCATGGATCAGGTTACATGTGCTGCCTCTCCGTGTTCAATTGATGATGGCCAGTTGATTGGATCACCTTCACTGACACCAATCACCATGGTAGCCAAGCTGATTGATGGTTACTTAGCCGAGGTTGCCCCGGATGTTAACTTGAAACTTCCAAAATTTGAAGCCCTTGCTGCTGCTGTTCCAGAGTATGCCAGGCCATTGGATGATGGTTTATATCGTGCTATAGACATTTATTTGAAGTCTCACCCTTGGTTGGTGGAATCTGAGAGAGAGGAACTATGTCGGCTAATGGACTGCCAAAAGCTTTCATTAGAAGCATGCACCCACGCAGCACAGAATGAACGGCTACCCATCAGAACAATAGTCCAAGTTCTATTTTTCGAGCAGCTCCAGCTCCGGACATCAATCGCTGGATGCTTTCTAGTTTCAGATAATCTCGAAGGATCAAGGCAATTAAGAAGCGGTTTGATACCAACTAATGAGGGTGGTTGGGCCACCGCGGTGAAGGAGAATCAGGTCTTGAAAGTCGGAATGGATAACATGAGGATGAGGGTATCCGAGCTTGAGAAGGAGTGCTCAAACATGAGGCAGGAGATCGAGAAATTGGGCCGCTCAAAGGGGTCAAACACATGGGGAACCGTCTCTAAGAAGTTCGGGTTTAAGATCAAATCTAATATGTGTAGTGCACAAGAAGGTTCAGTTAGCAACCAGAACAATGAAAATAGTAAGGTTGAGAAGTTGAAGAACAGACAAGTAGTGAAGCACAAGAAAAGTTCTTCTATTAGTGACAAAGCTTCTGTTTCTTCAATTGTTCCTTTTTAG 1941 0.4472 MACVKLGSKADAFQRQGQAWFCTTGLPSDLVVEVGEMSFHLHKFPLLSRSGVLFRLITEASESEEEEECVIHPPDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAEHLEMTEEHGEGNLISQAETFFNQVVLRSWKDSLRALQTCDDVLSHAETLHIVKRCIESLAAKASTDPNLFGWPVLERGGPMQSPGGSVLWNGISTGARPKNSSSDWWYEDVATLSLPLYKRLVAVMESRGIRQDIIAGSLAFYAKRYLPGLNRRHVSGESNTHLTSVTLGSPPSEDDQKVLVEEIDRLLPMEKGLVQTKFLFGLLRTAMILRVSQSCMSNLEKRIGMQLDQATLEDLLMPTFSYSMETLYNVDCVQRILDHFLAMDQVTCAASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDVNLKLPKFEALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREELCRLMDCQKLSLEACTHAAQNERLPIRTIVQVLFFEQLQLRTSIAGCFLVSDNLEGSRQLRSGLIPTNEGGWATAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGRSKGSNTWGTVSKKFGFKIKSNMCSAQEGSVSNQNNENSKVEKLKNRQVVKHKKSSSISDKASVSSIVPF* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0229 646 ProSiteProfiles BTB domain profile. 28 99 IPR000210 GO:0005515
Lan15g0229 646 Coils Coil 544 578 - -
Lan15g0229 646 Pfam NPH3 family 215 480 IPR027356 -
Lan15g0229 646 Gene3D Potassium Channel Kv1.1; Chain A 11 133 IPR011333 -
Lan15g0229 646 PANTHER - 1 619 - -
Lan15g0229 646 MobiDBLite consensus disorder prediction 603 646 - -
Lan15g0229 646 ProSiteProfiles NPH3 domain profile. 215 504 IPR027356 -
Lan15g0229 646 CDD BTB_POZ_NPY3-like 19 124 - -
Lan15g0229 646 Pfam BTB/POZ domain 27 115 IPR000210 GO:0005515
Lan15g0229 646 PANTHER OS12G0117600 PROTEIN 1 619 IPR043454 -
Lan15g0229 646 SUPERFAMILY POZ domain 16 116 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0229 Lan-Chr15 2571501 2575998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0229 8 574 EF-hand Containing Proteins AT3G44820 48.376 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0229 - - gmx:100794676 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0229 15 2571501 2575998 Lan14g0065 14 925311 930398 LSH
Lan15g0229 15 2571501 2575998 Lan3g0941 3 20571196 20575147 LSH