Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0065 ATGGCTTCTGTGAAATTTGGTTCCAAGGCTGATGCATTCCAGCGTCAAGGGCAAGCATGGTTCTGCACAACCGGGCTTCCGAGTGATTTAGTTGTTGAAGTTTGTGAGATGTCCTTCCATCTTCACAAGTTCCCTTTGCTATCTAGAAGTGGGGTTTTGTTCAGATTGATTACCAAAGCTTCAGAATCAGAGGAAGAGGAAGAATGTGTCATACACCTCTCCGATATTCCTGGCGGGGTGAAAACCTTTGAACTTGTGGCAAAATTCTGCTACGGCGTGAAACTTGAACTTACAGCATCAAATTTTGTTAATCTCTTGTGTGCTGCTGAGCATCTTGAAATGACTGAGGAGCATGGTGAAGGTAACCTCATTTCACAAGCTGAAACCTTTTTCAACCAAGTTGTCCTCCGAAGTTGGAAAGACTCTGTAAGGGCACTTCAAACCTGTGATGACGTTCTTCCCCATGCTGAAGTACTCCACATTGTGAAAAGGTGCATTGAATCACTTGCAGCTAAGGCATCTACTGACCCAAATTTGTTTGGATGGCCTGTATTGGAGCGCGGTGGGCCGATGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACCGGGGCAAGACCAAAGAATCCAAGTTCCGATTGGTGGTATGAGGATGTATCAAATTTGAGTTTGCCTCTTTATAAGAGGTTGATAGCTGTCATGGAATCTCGAGGCATTAGGCAGGATATTATTGCCGGTTCTCTTGCTTTCTATGCTAAAAGGTATCTGCCAGGGTTAAATCGACGTCATGCCTACGGTGATTCCAGTACCCATCTGGCACCAGTCACTTCGGGGTCTCCACCGTCTGAGGAAGACCAGAAGATTCTTGTTGAAGAGATTGATCAGTTACTCCCAATGGAAAAGGGCCTGGTCCATACAAAGTTCCTGTTCGGTCTACTTCGAACAGCCATGATTCTTCGAGTGAACCACTCTTGCATGTCAAATTTGGAGAAACGGATCGGGATGCAGCTTGATCAAGCTACTTTGGATGATCTCTTGATCCCTACTTTCTCATATTCAATGGAGACACTTTACAATGTTGACTGCGTGCAACGAATTCTTGATCATTTTCTTGCTATGGATCAGGTTACTGGTGCTGCATCTCCTTGTTCAATTGATGACGGCCGGTTGATTGGATCACCTTCACTGACATCTATCACCATGGTAGCCAAGCTGATTGATGGTTTCCTGGCTGAGGTTGCCCCAGATGTTAACTTAAAACTTCCCAAGTTCGAAGCCCTTGCTGCTGCTGTTCCCGAGTATGCCAGGCCTTTGGATGATGGCCTATACCGCACCATAGACATTTATTTGAAGTCTCACCCTTGGTTGGTGGAGTCAGAGAGAGAGCAGCTATGTAGGTTGATGGACTGCCAGAAGCTCTCCTTAGAAGCATGCACCCATGCAGCACAGAACGAGCGGCTACCGGTAAGAACAATAGTTCAAGTTCTATTTTTCGAGCAGCTCCAGCTCCGGACTTCAATTGCCGGTTGCTTTCTCGTCTCAGATAATCTTGACGGATCAAGGCAATTAAGAAGTGGTTTGATCGGAACCAACGAGGGTGGCTGGACATCCGCTGTGAAGGAGAATCAGGTTTTGAAAGTCGGAATGGATAATATGAGGATGAGAGTATCTGACCTTGAGAATGAATGCTCAAACATGAGACACGAGATCGATAAATTGGGCTGCACAAAAGGATCAAGCACGTGGGGAGCCGTCTCTAAGAAACTCGGGTTTAAGATCAAGTCTCAGATGTGCAGTGCTGAAGAAGGATCAGTTAGGAACCAGAACAAGAATGGAAATAGTAAGATTGAGAAGTTGAAGGGCAGACATATAGTGAAGCAGAAGAAAAGTTCTTCTATTAGTGACAAAGAATCTGTTTCTTCAATTGTTTCTTCTTAG 1944 0.4527 MASVKFGSKADAFQRQGQAWFCTTGLPSDLVVEVCEMSFHLHKFPLLSRSGVLFRLITKASESEEEEECVIHLSDIPGGVKTFELVAKFCYGVKLELTASNFVNLLCAAEHLEMTEEHGEGNLISQAETFFNQVVLRSWKDSVRALQTCDDVLPHAEVLHIVKRCIESLAAKASTDPNLFGWPVLERGGPMQSPGGSVLWNGISTGARPKNPSSDWWYEDVSNLSLPLYKRLIAVMESRGIRQDIIAGSLAFYAKRYLPGLNRRHAYGDSSTHLAPVTSGSPPSEEDQKILVEEIDQLLPMEKGLVHTKFLFGLLRTAMILRVNHSCMSNLEKRIGMQLDQATLDDLLIPTFSYSMETLYNVDCVQRILDHFLAMDQVTGAASPCSIDDGRLIGSPSLTSITMVAKLIDGFLAEVAPDVNLKLPKFEALAAAVPEYARPLDDGLYRTIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPVRTIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGLIGTNEGGWTSAVKENQVLKVGMDNMRMRVSDLENECSNMRHEIDKLGCTKGSSTWGAVSKKLGFKIKSQMCSAEEGSVRNQNKNGNSKIEKLKGRHIVKQKKSSSISDKESVSSIVSS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0065 647 Coils Coil 551 578 - -
Lan14g0065 647 Pfam NPH3 family 215 480 IPR027356 -
Lan14g0065 647 Pfam BTB/POZ domain 27 115 IPR000210 GO:0005515
Lan14g0065 647 Gene3D Potassium Channel Kv1.1; Chain A 11 133 IPR011333 -
Lan14g0065 647 ProSiteProfiles BTB domain profile. 28 99 IPR000210 GO:0005515
Lan14g0065 647 ProSiteProfiles NPH3 domain profile. 215 504 IPR027356 -
Lan14g0065 647 CDD BTB_POZ_NPY3-like 19 124 - -
Lan14g0065 647 PANTHER - 1 618 - -
Lan14g0065 647 PANTHER OS12G0117600 PROTEIN 1 618 IPR043454 -
Lan14g0065 647 SUPERFAMILY POZ domain 16 116 IPR011333 -
Lan14g0065 647 MobiDBLite consensus disorder prediction 604 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0065 Lan-Chr14 925311 930398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0065 8 574 EF-hand Containing Proteins AT3G44820 48.205 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0065 - - adu:107479347 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0229 15 2571501 2575998 Lan14g0065 14 925311 930398 LSH
Lan14g0065 14 925311 930398 Lan3g0941 3 20571196 20575147 LSH