Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0163 ATGATGTTTGCAAAATCTGAAGCTGTTGAGAAGAGTGGTGCTGGTAATCAGAAAAAGTTGGTGAAAGATGTTGAAACTATAAACAAAGCTATGTACTTGGACAGAAATTCTTCAAAAATTTCAACATCTAGTGCAATTTCTCGATCTAAATCCACTTGGAAACCCCAATCACCTGAACCCAAATCAAGGCTCAAAGGTAGTAGTAGTAGTAGTAGTAGCGGCAGAAGTAATGATAATGATAATTTGCAGAAGGATAAGAAGTCGATATGGAATTGGAGGCCATTGAAGGCCCTTTCGCATATCCGAAATAAGAGGTTCAATTGTAGTTTTAACCTCCAAGTCCATTTGATTGAAGGGTTACCTTCCAATTTTGATGATGCTAGCCTTAGTGTGTCTTGGAAGAGGCGAGACGGTGTTTTGGTGACCCGTCCGGCCAAGGTAGTTCAAGGTGTGGCTGAATTTGAAGAGAAGCTTTCTTACACTTGTTCAGTGTATGGCAGTAGGAGTGGACCTCACCATTCCGCGAAGTACGAAGCGAAGCATTTTTTGCTCTATGCTTCTCTAATCACTGCACCGGAGCTTGATTTGGGGAAGCACCGGGTTGACCTCACGAGGTTGCTTCCTCTTACGCTGGAGGAGCTTGAAGAGGAGAAGAGCTCAGGGAAATGGACTACGAGTTTTAGATTGTCAGGAATGGCTAAGGGCGGTGTAATGAATGTTAGTTTTGGGTATATGGTGGTTGGTGATAATGCTAGTGCTACCAGAGACAGCCATAAAGCTCCTAATGTTTTGACTTCTCGGCAGAATAGTACGGCTTTAATGAAACCAGATGTTAAACCAAAACAGTTTGATGGAAGCAGCAACTTGAGGCGTGCTCAAAGTTTGTCAACCAAACAGTTTGATGAGGTAAAGGATCTTCGTGAGATACTGCCAGTTTCAAAGTCAGCACTTGCCAGCTCAATAGACGTCTTATACAAGAAATTTGATGAAGAAAAGGCATGTAGTCCTTCACACAGTAAACCTGAACTTGACGTGTTTACAGAAAATCTTGACCCGATCAAACCAGATGCTTGTGCTTCACCTGATCTTCAGGAAGAAAAGCCTGAAGAGCATGTAGGCGATGATGGAAATACATGTCCAGCGCATGACAAACATGAAGTGGATGTGTTTCAAGAAAAACTGAAAATGGTTGAACCAGATGGCTATCCTTTACCCGATTCTGGAAAAGAAAACCCTGAAGACTGTCAAGGTGATGAATTTTTTGTTGTTGATAAGGGCATAGAATTGTCGCTAGATGAGCCTGTTAAACCAGAGGAATCCATCATAAAGGCTCCTGAAGATGCTGCTACAGTATACAGTACCGATAGCCTCGATGCTGCAGGGATACAAGTATCTTCTAAAGATAGTGTGAAACATGATTCCCTGGATGAGGTAAATGGTAGTAGTTCTAAGGATCAGGCCGCGGCACCTGGATTTTCTTGTCAAGAGGATGACTTATACACGGAAGAGCTGCTCCTGCAAGAGTTTGAATCAGCTTTAAATAGTGTCTCAGATTTGAAGACAGTGGCATGGGAATCTCCTAAAATCATGGAAGCCAAATCTGAATATGATAGGAGAAAGTCACATAGCTTTGATGATGTTACAGAGTTAGTTACCAGTGAATTTTTAAGCATGCTAGGCGTAGGTCACGGTCCAACAGGCTTGAGTTCTGAAAGCGAGCCCGAGTCTCCAAGAGAGATCCTTTTAAGACAATTTGAGAAGGAGGCTCAAGATGGGGGCTTTTCATTATTTGGTTTTGACATGGAGTATGATAATGAAGAATATGGTGGAGTTGATGCTTCTATTGGATCAGAGGAGTGGAACTCCTCTGAGGGTATTAAGTCATCATCCTTGTTGCAATCTATGCCCGAGGAGCATGTCGTTGAGTCTCATGATGTCGGAAGCAAACAGAGGGCTCAGATGCTAGAAGGCTTGGAAACAGAAGCCTTAATGCGTGAATGGGGTTTGAATGAGAAGGCTTTTCATCATTCTCCACCAAAAGACTGCTCTGGTTTTGGAAGTCCAATTCCATTACCCCCCGAAGAGCCGCCTACGTTGCCTCCTCTGGCTGACGGGCTGGGCCCTTTTCTTCAGACAAAAGATGGGGGTTTTCTACGGTCCATGGATCCTTCAATTTTCAGTAACTCTAAAAGTGGCGGGAGCTTAGTCATGCAGGTTTCCAACCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGAATTATGGACATTTTGCAGTGTTTGGCTTCAGTGGGAATTGAGAAGCTCTCAATGCAGGCAAAGGAGTTAATGCCTCTGGAAGATATCACAGGGAAGACAATGCAACAAATAGCATGGGAAGCTATGCCTGCCTTAGAGGGAACAGAAAGGCCGAGTCATTTGCAGCATGATTCAATTACAGGGCTAGATACTACTTCTGTGCAAAGGGAGCTGAAAGGAACAGCACCTGGACTAAAGCCTAATAAGATTAGTTCAAGTTCAGTGAGAAACCAGACAGGCTCAGACTCAGAGTTTGTTTCATTGGAAGATCTTGCTCCATTGGCTATGAATAAAATTGAAGCACTTTCGGTGGAGGGTTTGAGAATACAATCTGGGATGTCAGAGGAGGATGCACCGTCAAACATTGTTGCTCAGTCGATTGGGGATAATATTTCAGCTCTCAAGGGTAAGGGGGTTGATGTTAGTGGATCCCTTGGCCTGGAAGGAGCTGCTGGATTGCAGTTGTTGGATGTCAAAGACGGCAGTAATGACGGAGTTGATGGGATGATAGGCCTGTCATTGACTCTTGATGAATGGATGAGGCTGGATGCAGGTGAGATTGATGACATGGATAATATCAGTGAGCATACTTCCAAAGTTCTTGCAGCCCATCATGCTAACTCGTTTGACTCTATACGCGGGAGTTCAAAGGGGAAACGGGGGAAGGGTAGAAAGTGTGGTTTGCTGGGAAACAATTTCACAGTAGCATTGATGGTGCAACTTCGTGATCCACTGAGAAATTATGAGCCTGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGTGTTTGTCCCACCAAAGCCAAAAATTTTCTTTAATGTGACCGAGTTAAGGAACAATGAAGATAAGGATGATGAGAGCGAAGTAGTAGCAGCAGCGAAGGTGGAGGAGATAAAGGAGGACAATAAAGAGGATAAAAGCTCTGAACAGGAGGGAATTCCTCAATTCAAAATTACCGAAGTTCATGTTGCAGGTTTGAAGACTGAGCCTCAAAAGAAGAAGCTTTGGGGCAGTTCAAGCCAGCAGCAGTCTGGGTCCCGCTGGTTGCTTGCTAATGGAATGGGGAAGAACAACAAACGTCTGGTAATGAAGTCAAAGGCTGCGGTTAAATCTAGTGCTCCGGTTACCACTAAGGTGCAGCCTGGTGACACCTTGTGGAGCATCTCGTCTCGAATTTATGGTACGGGAGCAAAATGGAAGCAACTGTCCGCAATGAATCCACATATAAGAAACCCCAATGTCATCATACCAGATGAAACTATAAGACTTAGTTGA 3576 0.4402 MMFAKSEAVEKSGAGNQKKLVKDVETINKAMYLDRNSSKISTSSAISRSKSTWKPQSPEPKSRLKGSSSSSSSGRSNDNDNLQKDKKSIWNWRPLKALSHIRNKRFNCSFNLQVHLIEGLPSNFDDASLSVSWKRRDGVLVTRPAKVVQGVAEFEEKLSYTCSVYGSRSGPHHSAKYEAKHFLLYASLITAPELDLGKHRVDLTRLLPLTLEELEEEKSSGKWTTSFRLSGMAKGGVMNVSFGYMVVGDNASATRDSHKAPNVLTSRQNSTALMKPDVKPKQFDGSSNLRRAQSLSTKQFDEVKDLREILPVSKSALASSIDVLYKKFDEEKACSPSHSKPELDVFTENLDPIKPDACASPDLQEEKPEEHVGDDGNTCPAHDKHEVDVFQEKLKMVEPDGYPLPDSGKENPEDCQGDEFFVVDKGIELSLDEPVKPEESIIKAPEDAATVYSTDSLDAAGIQVSSKDSVKHDSLDEVNGSSSKDQAAAPGFSCQEDDLYTEELLLQEFESALNSVSDLKTVAWESPKIMEAKSEYDRRKSHSFDDVTELVTSEFLSMLGVGHGPTGLSSESEPESPREILLRQFEKEAQDGGFSLFGFDMEYDNEEYGGVDASIGSEEWNSSEGIKSSSLLQSMPEEHVVESHDVGSKQRAQMLEGLETEALMREWGLNEKAFHHSPPKDCSGFGSPIPLPPEEPPTLPPLADGLGPFLQTKDGGFLRSMDPSIFSNSKSGGSLVMQVSNPVVVPAEMGSGIMDILQCLASVGIEKLSMQAKELMPLEDITGKTMQQIAWEAMPALEGTERPSHLQHDSITGLDTTSVQRELKGTAPGLKPNKISSSSVRNQTGSDSEFVSLEDLAPLAMNKIEALSVEGLRIQSGMSEEDAPSNIVAQSIGDNISALKGKGVDVSGSLGLEGAAGLQLLDVKDGSNDGVDGMIGLSLTLDEWMRLDAGEIDDMDNISEHTSKVLAAHHANSFDSIRGSSKGKRGKGRKCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKPKIFFNVTELRNNEDKDDESEVVAAAKVEEIKEDNKEDKSSEQEGIPQFKITEVHVAGLKTEPQKKKLWGSSSQQQSGSRWLLANGMGKNNKRLVMKSKAAVKSSAPVTTKVQPGDTLWSISSRIYGTGAKWKQLSAMNPHIRNPNVIIPDETIRLS* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0163 1191 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 103 239 IPR019448 -
Lan15g0163 1191 MobiDBLite consensus disorder prediction 468 490 - -
Lan15g0163 1191 Pfam LysM domain 1145 1190 IPR018392 -
Lan15g0163 1191 MobiDBLite consensus disorder prediction 37 78 - -
Lan15g0163 1191 SUPERFAMILY LysM domain 1142 1190 IPR036779 -
Lan15g0163 1191 CDD LysM 1145 1190 IPR018392 -
Lan15g0163 1191 ProSiteProfiles LysM domain profile. 1142 1190 IPR018392 -
Lan15g0163 1191 Gene3D LysM domain 1132 1191 IPR036779 -
Lan15g0163 1191 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1190 IPR039614 -
Lan15g0163 1191 ProSiteProfiles C2 NT-type domain profile. 98 246 IPR019448 -
Lan15g0163 1191 SMART LysM_2 1143 1191 IPR018392 -
Lan15g0163 1191 MobiDBLite consensus disorder prediction 1 21 - -
Lan15g0163 1191 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1190 - -
Lan15g0163 1191 MobiDBLite consensus disorder prediction 37 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0163 Lan-Chr15 1801238 1805813 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0163 - - mtr:MTR_2g040970 1585.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0163 15 1801238 1805813 Lan14g0125 14 1546888 1551621 LSH
Lan12g0987 12 16600720 16605373 Lan15g0163 15 1801238 1805813 PCT
Lan1g1286 1 22623872 22628552 Lan15g0163 15 1801238 1805813 PCT
Lan15g0163 15 1801238 1805813 Lan12g0987 12 16600720 16605373 PCT
Lan15g0163 15 1801238 1805813 Lan1g1286 1 22623872 22628552 PCT