Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0987 ATGTTCAATCCTTTTCAACGCTACCTGATGATATTATCCAAAGTTGAAGATGATAAGAAGAGTAGTGAAGATGCTGATAATCATAACAAGTTATTAAAAGATGTTGAAACTATAAGCAAAGTTTTGTACCTGGATGAAAGCTGTTGTTGGAATTCGACATCCACTGCAATTTCTCAATCCAAGTCAACCGAGACGTTCCCCTTACCTGATCCGAAATCAAAGCCTAAAGCCAGTGTAGATGATAAATCAGTCAAGGATAAGAAGTCCATATGGAATTGGAAACCATTAAAAGCCCTTTCCATCAACCGTAGTCGAAAGTTTAATTGTTGTTTTTCTATCCAAGTGCATTTGATTGAAGGGTTGCCTTTGAGTTTCAATGATGCTAGCCTTTGTGTGTACTGGAAGAGGCAGGATGAGGTTATGGTGACCCATCCGGCCAAGGTGATACAATGTATGGCCGAGTTTGAAGAGATGTTGACTCACACTTGCTCAATCTCTGGAAGCAGGAGTGCCCCCCACAACTCTGCAAAATATGAAGCTAAACATGTTTTGCTCTATGCTTCTGTGGTTGGTGCGCCAGAACTTGATTTAGGGAAGCACCGGGTAGACCTCGCGAGGTTGCTTCCTCTCACACTGGAAGAGCTTGAAGAGGAGAAGAGCTCAGGGAAGTGGACTACAAGTTTTAGATTATCAGGAGCGGCTATGGGTGCCACAATGAATGTCAGTTTTGGGTATGTGGTTGTTGGTGATAATACTAGTGCTACCAATGCATTGACTTTGAGGCAGAATAGTATGGCGGCCTTGATGAAATCGGGTATTAAATTCAGACAGTCTGATGGAAGTTTGCCAAGCAATACCAATCAGTATTCATATCAAAATGTAGATGAAGTAAAGGATCTTCATGAAGTATTGCCATTATCGAAATCAAAATTGGCCTGCTCAATAGAAGCCATATATAAGAAACTTGATGAAGAAAAGACCTTTAGTCCTCTGCAAAATAAACCTAAAGAAATTGATGTATTCGCAAAAGATTTTGAGCCAATCAAAGTAGATACATTTTCTTTATCTGATTCTGGAAAAGAAAAGCCAGAAGAGCTTCTAGGTATCGAAGGAAAAACATGTAGCCCAGTGCACGACAAACCTGAATTTGAGGTATGTGAAGAAAATGTGGAGACAGTTAAGCTAGATTGTTATCCTTCACCTGATTCTGGAAAAGAAAATCATGAGGCTGAAGAGTGGGAAAGTAATAAAGGAAAAACACACAGTCCAATGCATGACAAGCTTGAATTTGATCTGCTTCAAGAAAACACGGACACAGTTAAGCCGGAAGGTTATCCTTCACTTGACTCTGGAAGAGAGAAGTGTGAAGCGTATGAAGGTAATGGATTTCCTGTTGTTGATCGGGGCACAGAATTGTCATCAAATGAACATATTAAACTAGAGGAACCAATAGTAAAGGCTCTTGTCCATGCTCATACAGTTGACAGCACTTGTTGGATTGATACTTCTGGCATACGAGCATCTTTTGAAGATAGTGATAATCATGATTCCCTGTATGAAGTAAATGATAGTTCAAAGGAAAAGGCTATGGTACATGAGTTTTTTTACAAAGAGAACAACGTATGCACAAAAGAACTTCTCTTGCAAGAACTGGAATCAGCTTTAAACAGTGTCTCAGATTTGGAGAGTGTGACATTTGACTGTCCTGATATTATGGAAGTCAAATCTGAATATGAGATGAGAAAGTCCCATAGCTTAGATGATTTTACAGAATCGGTTGCCAGTGAATTCTTAAGTATGCTGGGCATAGACCATAGTCCAATGGGCTTGAGTTCTGAAAGCGAGCCTGAGTCTCCAAGAGAGCGCCTTTTAAGGCAATTTGAGAAGGACGCGCTGTCTGAAGGCTTCTCTTTATATGATTTTAACACGGACAGCGATAATGAAAATGGCGATCATTCTGATGCTTCTTTTGGATCTGAGCAGAGGGAGTTCTCTGACAGGATTAAGTCATCATCCTTGTTGGAAGATCTGCAGGAAGGGCATTTTATTGAGTCTCGGGATGTGAAGAGCAAAATAAAGGCACAGATGCTACAAGACATGGAAGCAGAAGCCTTAATGCGTGAATGGGGTTTGAATGAGAAGTCTTTTCAGCATTCTCCACCAAAAGATACTACTGGTTTTGGAAGTCTAATTAATTTACAGATGACAGAGCCTCACATATTGCCTCATCTGCCAGAGGGGTTAGCGCCTTTTCTTCAGACAAAAGATGGGGGGTTTCTACAGTCTGTGAATCCCTCACTTTTCAGGAATGCTAAAGGTGGGGGGAACTTAATCATGCAGGTTTTCAACCCAGTGGGAATTGAAAAGCTTTCCATGCAGCCAAATAAGTTAATGCTTCTGGAGGATGTCACCGGGAAGAATATCCAACAAATAGCATGGGAATCTATTCCAGTTTTGCAGGGAACAGAAAGGCAATGTCATTTGCAGAATGATTTAGTAACAGTGCAAGACGCTTCTTGTGTGCAAACGGATTTGGAAGGAACGTTATCTAAACGAAAATCCATCAAGTTTAAATCCAGTTATGTTGGCAACCAGACAGGCAAAGAGTTTGTTTCATTGGATGATCTTGCTCCACTAGCTATGGATCAAATTGAAGTACTTTCAATGGATGGTTTGAGAATACAATCTGAGATGTCGGAGGAGGATGCATCATCAAACATCATCGCACAATCCTTTGGAGAAATTTTAACACTTCAGGGCGAGGGTGTTAATATTAGTTGGTCCCTTGCTCTGGATGGAGCTGCTGCTGAATGGATGAGACTAGATTCTGGTGAATTTAATGATGATAAAAATAGTATCAGTGAGCACACATCAAAAGTTCTAGCAGCCCATCATGCTAATAACTCTTTTGACTTAATTCATACGAGCTCCAAGGGAGAGAGGAAACAATGTAAAGGCCCTGCCAGGAAATGTGGTTTACTGGGAAACAATTTCTCAGTAGAATTAATGGTGCAACTCCGTGATCCTATGCGAAATCATGTGACTCTTGGAAGACCAATGCTTTCTATTGTCCAAGTTGAGAGAGAATTTGTTCCACCAAAGCAAAGAATTTACAGTAGTGTGTCTGAGGCAGCAAACAGTAATGATGGGGACGATGAGTTTGAAATAGTGGCGAAGGTGGAGATGAATGAGAGAAAGAAAGAGGTGAAATTTTCTGAAGAGAAGGGCATTCCTCAATTCAGTAGTACTAAAGTCCATGTTGCAGGTCTGAAAACCAAGCCTCAGAAAAATAAGCTGAGGGGCTCGTCAAGTCAGCAACAGTCCGGTTCCCGATGGTTGCTGGCTAATGGAATGGGAAAGATCAATAAGCATCCATTATTGAAATCAAAGGCTGCAACCTGGTGA 3405 0.4088 MFNPFQRYLMILSKVEDDKKSSEDADNHNKLLKDVETISKVLYLDESCCWNSTSTAISQSKSTETFPLPDPKSKPKASVDDKSVKDKKSIWNWKPLKALSINRSRKFNCCFSIQVHLIEGLPLSFNDASLCVYWKRQDEVMVTHPAKVIQCMAEFEEMLTHTCSISGSRSAPHNSAKYEAKHVLLYASVVGAPELDLGKHRVDLARLLPLTLEELEEEKSSGKWTTSFRLSGAAMGATMNVSFGYVVVGDNTSATNALTLRQNSMAALMKSGIKFRQSDGSLPSNTNQYSYQNVDEVKDLHEVLPLSKSKLACSIEAIYKKLDEEKTFSPLQNKPKEIDVFAKDFEPIKVDTFSLSDSGKEKPEELLGIEGKTCSPVHDKPEFEVCEENVETVKLDCYPSPDSGKENHEAEEWESNKGKTHSPMHDKLEFDLLQENTDTVKPEGYPSLDSGREKCEAYEGNGFPVVDRGTELSSNEHIKLEEPIVKALVHAHTVDSTCWIDTSGIRASFEDSDNHDSLYEVNDSSKEKAMVHEFFYKENNVCTKELLLQELESALNSVSDLESVTFDCPDIMEVKSEYEMRKSHSLDDFTESVASEFLSMLGIDHSPMGLSSESEPESPRERLLRQFEKDALSEGFSLYDFNTDSDNENGDHSDASFGSEQREFSDRIKSSSLLEDLQEGHFIESRDVKSKIKAQMLQDMEAEALMREWGLNEKSFQHSPPKDTTGFGSLINLQMTEPHILPHLPEGLAPFLQTKDGGFLQSVNPSLFRNAKGGGNLIMQVFNPVGIEKLSMQPNKLMLLEDVTGKNIQQIAWESIPVLQGTERQCHLQNDLVTVQDASCVQTDLEGTLSKRKSIKFKSSYVGNQTGKEFVSLDDLAPLAMDQIEVLSMDGLRIQSEMSEEDASSNIIAQSFGEILTLQGEGVNISWSLALDGAAAEWMRLDSGEFNDDKNSISEHTSKVLAAHHANNSFDLIHTSSKGERKQCKGPARKCGLLGNNFSVELMVQLRDPMRNHVTLGRPMLSIVQVEREFVPPKQRIYSSVSEAANSNDGDDEFEIVAKVEMNERKKEVKFSEEKGIPQFSSTKVHVAGLKTKPQKNKLRGSSSQQQSGSRWLLANGMGKINKHPLLKSKAATW* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0987 1134 MobiDBLite consensus disorder prediction 638 662 - -
Lan12g0987 1134 MobiDBLite consensus disorder prediction 1096 1110 - -
Lan12g0987 1134 MobiDBLite consensus disorder prediction 645 662 - -
Lan12g0987 1134 ProSiteProfiles C2 NT-type domain profile. 99 247 IPR019448 -
Lan12g0987 1134 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 411 1131 - -
Lan12g0987 1134 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 12 411 - -
Lan12g0987 1134 MobiDBLite consensus disorder prediction 1086 1110 - -
Lan12g0987 1134 Coils Coil 544 564 - -
Lan12g0987 1134 MobiDBLite consensus disorder prediction 61 81 - -
Lan12g0987 1134 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 104 246 IPR019448 -
Lan12g0987 1134 MobiDBLite consensus disorder prediction 397 423 - -
Lan12g0987 1134 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 12 411 IPR039614 -
Lan12g0987 1134 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 411 1131 IPR039614 -
Lan12g0987 1134 MobiDBLite consensus disorder prediction 401 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0987 Lan-Chr12 16600720 16605373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0987 - - lang:109362358 2209.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0987 12 16600720 16605373 Lan1g1286 1 22623872 22628552 LSH
Lan12g0987 12 16600720 16605373 Lan15g0163 15 1801238 1805813 PCT
Lan12g0987 12 16600720 16605373 Lan14g0125 14 1546888 1551621 PCT
Lan15g0163 15 1801238 1805813 Lan12g0987 12 16600720 16605373 PCT
Lan14g0125 14 1546888 1551621 Lan12g0987 12 16600720 16605373 PCT