Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0144 ATGGCAAGTAAGAAACATCCACACCCATGGTCACCACTCGAAGCACCCAAAGACCTTGCCCAAAAGCTTAGTCTTGACCCTGAAACCCTTTCACTAGCCTCATCAGATTTTGGTCTTATAGAACATAAAACACCATTAGCTGTTTTTGAACCATCATATGTAAGTGACATAGTAAACTTGATAAAGTACTCAAATTCACTTCCAATCCCTTTCACCATAGCACCAAAAGGGAAAGGCCATTCAACTCATGGACAAGCCATGACAAATGATGGGGTTGTTGTGAATATGACTAGGTTGAGTGATTTTAGAAATGGGTCTGGGATTATAGTGTATGATGAATATGTTGATGTTGGTGCTGAACAACTTTGGATTGATGTGTTGCATGAAACACTTAAGCATGGACTCACACCACTTTCTTGGACTGATTACCTGTATTTGACTGTTGGTGGAACACTCTCTAATGCTGGGATCACTGGCACAACTTTCAAATTTGGCCCTCAAATCTCCAATGTCCTTGAATTAGATGTTGTTACTGGAAAAGGAGACCTAGTGACATGTTCTCCTGATAACAACTCAGAGCTATTTTATAGTGTTCTTGGAGGATTAGGTCAATTTGGGATTATAACAAGAGCAAGAATAGTTCTAGGACCTGCACCTACAAGGGTGAAATGGGTTCAATTGCTTTACAGTGACTTTTCAGCATTTATTGAAGACCAAGAACATTTAATCTCATTCCATGAAAGGAATGAAACTAAAGGAGCAGATCATATAGCAGGTTGCATTCTAGTGAATCATTCAAGGTTGAACCTTTCATTTTATCCACCAAATCATCATCAAAGGATAACTTCTTTGGTTACTGAATATGGCATTATCTACAGCTTAGAGCTAGTCAAATATTATGACAATAATTCTCAAGAACTTGTCAATGAGGAGGTTCAAAATTTGCTCAAAGTGTTAAAGTTTATACCTTCATTTTCATTTGAGAAAGATGTATCATATGAGGAGTTTCTTAATAGACTTCATGAAAGTGAATTAGTTCTCAAGCCTAAAGGACTTTGGAATGTCCCTCATCCTTGGATGGATTTATTTGTTCCAAAATCTCGAATCACAGATTTTAACGAAGGAGTGTTGAAGGGCATTATTCTTAAAGAAAATATTTATGTTCGGTTTCTTGTATTTTATCCGATGAACCAAAGCAAGTGGGATGATAGAATGTCTTCAGTTATTCCAGATGAACATATTTTCTATGCTTTGGCTTTTTTTCGTGCAACTGGGTTTGATAAAGTGGAGGTGGAATCTTCTGAGGCTCAAAACCAACATATACTAGAGTTTTGTAAGGATAATGGTATTAAATCAAAGGTATATTTGGCCTCATACAAAACACAAGAAGAGTGGGTTGAACACTATGGCTCAAAATGGAAAATTATTGAAAAAAGAAAAGCTGAATTTGATCCTAAAAGAATATTGTCTCCTGGGCAAAGGATTTTCAATTAA 1494 0.3655 MASKKHPHPWSPLEAPKDLAQKLSLDPETLSLASSDFGLIEHKTPLAVFEPSYVSDIVNLIKYSNSLPIPFTIAPKGKGHSTHGQAMTNDGVVVNMTRLSDFRNGSGIIVYDEYVDVGAEQLWIDVLHETLKHGLTPLSWTDYLYLTVGGTLSNAGITGTTFKFGPQISNVLELDVVTGKGDLVTCSPDNNSELFYSVLGGLGQFGIITRARIVLGPAPTRVKWVQLLYSDFSAFIEDQEHLISFHERNETKGADHIAGCILVNHSRLNLSFYPPNHHQRITSLVTEYGIIYSLELVKYYDNNSQELVNEEVQNLLKVLKFIPSFSFEKDVSYEEFLNRLHESELVLKPKGLWNVPHPWMDLFVPKSRITDFNEGVLKGIILKENIYVRFLVFYPMNQSKWDDRMSSVIPDEHIFYALAFFRATGFDKVEVESSEAQNQHILEFCKDNGIKSKVYLASYKTQEEWVEHYGSKWKIIEKRKAEFDPKRILSPGQRIFN* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0144 497 SUPERFAMILY FAD-linked oxidases, C-terminal domain 219 497 IPR016164 GO:0003824|GO:0050660
Lan15g0144 497 Gene3D - 221 455 IPR016170 -
Lan15g0144 497 Pfam FAD binding domain 45 187 IPR006094 GO:0050660
Lan15g0144 497 PANTHER GULONOLACTONE OXIDASE 8 497 - -
Lan15g0144 497 Gene3D - 96 220 IPR016169 -
Lan15g0144 497 Gene3D - 26 496 IPR016167 -
Lan15g0144 497 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 8 497 - -
Lan15g0144 497 ProSiteProfiles PCMH-type FAD-binding domain profile. 41 218 IPR016166 GO:0071949
Lan15g0144 497 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 219 496 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lan15g0144 497 SUPERFAMILY FAD-binding/transporter-associated domain-like 22 217 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0144 Lan-Chr15 1542867 1547243 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0144 K00279 - gmx:100816815 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0144 15 1542867 1547243 Lan14g0134 14 1657303 1661550 LSH
Lan12g1003 12 16719669 16723461 Lan15g0144 15 1542867 1547243 PCT
Lan15g0144 15 1542867 1547243 Lan12g1003 12 16719669 16723461 PCT