Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0134 ATGGTGAAGAATAATTACCCTTTTTCAACATACTTCATCCTACTTCTAATAACCATAACTCGTTTGATATCTACAGTTAGCAAAACTGAACAATGGAAAACTCTACTACCACCAAAACTTGCCACTCTTGAAAGCATTTCACACAAGCTTCAAGATGACCCAGAAGCCATTAAATCAGCTTCAAAAGACTATGGAAACCTTGTACACAATTTCCCTTTAGCAGTGTTTCATCCATCTTCAATATATGATATAGTGAGCTTGGTAAAACATTCATATAACAGCTCTAACCCTTTCAACATAGCTGCAAGGGGACAAGGCCATTCAACTCGAGGACAAGCCATGGCGAGTGATGGGGTTGTTGTGGACATGGCTGGGTTCAGAGAAAGAAGAAATGGTGTTGGGATTAGTGTTATTTTGGACCCTTTTGTTGAGAGTTATTATTACTATGCTGATGTTGGAGGGGAACAACTATGGATTGATGTGTTATACAAGAGTCTTGAATATGGACTTGCACCTGTGTCTTGGACTGATTATTTGTACTTGACTGTGGGAGGAACCCTTTCTAATGCTGGGATCAGTGGCCAAACATTCCACTATGGGCCTCAGATTAGCAATGTTCATGAAATGGATGTTATCACTGGAAAAGGAGATTTTATAACATGCTCTTCGAAGACGAATTCAGAGTTATTTCATGCGGTTCTTGGAGGATTAGGACAATTTGGAATCATAGCAAGGGCAAGAATTGCACTTGAACCTGCTCCCAAAAGGGTTAAATGGGTGAGACTTTTATATAATGATTTCTCAGCTTTCACCAAAGACCAAGAACGATTAATATCAATCAAAGGAAAGAGACAAAAAAATGCATTGGATTATTTGGAAGGAATACTTATAATGCACCAAGGACCCATAAATAATTGGAGATCTTCTTTCTTCCCTTTAGCCGACCATCCAAGAATAATTTCCCTAGTAACCAAACATAGCGTCCTCTATTGCCTTGAACTTGCCAAATATCATCATGCCCAATCTCATAACAATGTGGACAAGGTAACATATCTTTTCTAA 1062 0.3861 MVKNNYPFSTYFILLLITITRLISTVSKTEQWKTLLPPKLATLESISHKLQDDPEAIKSASKDYGNLVHNFPLAVFHPSSIYDIVSLVKHSYNSSNPFNIAARGQGHSTRGQAMASDGVVVDMAGFRERRNGVGISVILDPFVESYYYYADVGGEQLWIDVLYKSLEYGLAPVSWTDYLYLTVGGTLSNAGISGQTFHYGPQISNVHEMDVITGKGDFITCSSKTNSELFHAVLGGLGQFGIIARARIALEPAPKRVKWVRLLYNDFSAFTKDQERLISIKGKRQKNALDYLEGILIMHQGPINNWRSSFFPLADHPRIISLVTKHSVLYCLELAKYHHAQSHNNVDKVTYLF* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0134 353 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 254 349 IPR015345 GO:0009690|GO:0019139|GO:0050660
Lan14g0134 353 ProSiteProfiles PCMH-type FAD-binding domain profile. 68 253 IPR016166 GO:0071949
Lan14g0134 353 PANTHER GULONOLACTONE OXIDASE 12 352 - -
Lan14g0134 353 Gene3D - 46 138 IPR016167 -
Lan14g0134 353 SUPERFAMILY FAD-linked oxidases, C-terminal domain 254 345 IPR016164 GO:0003824|GO:0050660
Lan14g0134 353 Gene3D - 255 352 IPR016170 -
Lan14g0134 353 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 72 107 IPR006093 GO:0016491
Lan14g0134 353 PANTHER CYTOKININ DEHYDROGENASE 1, FAD AND CYTOKININ-BINDING PROTEIN 12 352 - -
Lan14g0134 353 Pfam FAD binding domain 72 222 IPR006094 GO:0050660
Lan14g0134 353 Gene3D - 143 254 IPR016169 -
Lan14g0134 353 SUPERFAMILY FAD-binding/transporter-associated domain-like 49 252 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0134 Lan-Chr14 1657303 1661550 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0134 K00279 - gmx:100787676 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0144 15 1542867 1547243 Lan14g0134 14 1657303 1661550 LSH
Lan12g1003 12 16719669 16723461 Lan14g0134 14 1657303 1661550 PCT
Lan14g0134 14 1657303 1661550 Lan12g1003 12 16719669 16723461 PCT