Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0127 ATGCGCTCAGGAGTTTGTACATTGCAGCAGACCCTCACAGCTGAGGCTGCTTCAATCTTGAAGCACTCTCTTGTGTTGGCGCGCCGTAGGGGCCATGCACAGGTCACCCCTCTGCATGTTGCAGCCACATTGCTGAGCTTAAGGGCAAGTAGTCCCTTCAAGAGGGCATGTCTGAAATCTCAGCCACAGTTTCAAACTTCATCACACCCTCTTCATTGCAAAGCTCTTGAACTTTGCTTCAATGTTGCACTCAACAGGCTTCCAACAACACAAGGTCCTAGTTTTCTACAAAACCAACCTTCTCTTTCTAATGCTCTCATTGCTGCACTCAAAAGAGCACAAGCACACCATAGAAGAGGGTGCATAGAACAACACCACCACCACCAACAACAACAACCACTTCTCATTGTAAAAGTGGAGTTAGAACAACTCATCATATCTATTCTAGATGACCCTAGTGTTAGTAGGGTTATGAGAGAAGCTGGTTTCTCTAGCACTGATGTGAAGAACAACATAGAAGACAACAAAACTTCAACAACAACAACAACATTAACAAGTTCTGTTTTTTACAACAATTCTTGTGGTGGTGTTTTCTCTTCTCCTTGTTCACCTAGTGAAAACCAAAAAAAGCAGCATTTTTTGGGTTCTTACACCAATTCTCATGAGTATAGTACACCATTGATGTTTCCCATCACTCATGAAGAAGATATGAAAGTGGTTTTAGATATTCTTTTAGGTAAGAATAAGAAAAAGAACAGTGTTATAGTTGGTGATTCTTTATCATTAAATGAAGGTCTTGTGGATGAGATAATGAGAAAATTTGAAAGAAGAGAAGTACCTAATGAGTTAAAGACAACAAATTTCATAAAGTTTCAATTTTCTTCTTTGAGTTTCATGAATAAAGATGAAGTGAAAATGAACCTTTCATCTCTGAAAAAGAAGGTAGATTCTGTTATATCAAGTGGAAGGGGTGCTATATTTTATGTTGGAGATTTGAAGTGGATAGTAGAGGGAATTAGTTATGAGAGTGTTGATGTTGTAGTTGAAGAAATAGGGAAATTGTTTTCTGAGTTGAGAGATTCAAACACTAGTAAGGTTTGTGTTATGGGGACAGCAAGTTATCAAACATACATGAGATGTCAAATGAGACAACCTCCTCTTGAGACTCACTGGAATCTTCAGGTTGTTCCTGTTCCATCTGGTGGACTTGGATTGACTCTTCATGCTCCCAGTGTCTATGATTCAAAGATGACCAACTCTCATAACCCATCTCAAATTCTGGAAACAAAACTGTTCAGTATCAAGGAGGAGCATGATAAACTCAATTGTTGTGAAGAATGTGACTCAAATTATGAAAAAGAAGCTGTTTTGTTCAAACCAAGCCATAAGAAACTATTACCTTCATGGCTTCAGTCTCACAGCACTGAAGTCCATCATAAGGATGAAATAACTCAGCTGAAAAGAAAATGGAATGGACTAGGCCATTGTCTCCACCAAAGAAAACAACCTCAAAGCCATTGGAGCAATAGTTTATATGAAAATCATAGTTCAAATGCTAAGATCTACCCTTATAATTCATCATACCCCTGGTGGCCAAGCCAAACTAGTGTCTTCACTGATTCAAGTTCTATATCTTTTGCTGATTCTGCTGCAGCAAGACCAGCTTATAGCTCCAACCTTGTCCCTCACTTCAAGCATCAACAATCATGCACCATTGAGTTCAGTTTCATCAATGATGTAACTGATGAGAAAAAGGAAGAAACAACAATGTTGGATTCAGTTAAGGGCATTGTTGAAGATAAGGAAGTAAAGGTTACTCTTGCTCTTGGAAATTCAACATATAGTGATGGTTCAAGGGAAAAGGTGGAAAGTATAAGTGATAATACAAGACTTGTGCAACAAGCTCATATTTGTAAAATGTTGCAGGAGAATGTGCCATGGCACTCTGAGAAAGTTTCTTCAATATCAGAAGCATTGGTTCTTGGTTGTTCCAAATCAGCAATGCAAAAAAGTGCTACATGGTTATTCATGCATGGCAATGACTATGTTGGGAAAACGAGGTTGGCGCGCGCAATTGCAGAATCATTTTTCGGCTCAGTGAATGATGATAAGTTCCTTCACTTGGACATGATGATCAAAACATGTGATGACTTAGGAACAGAAACTCAATTTTCTGAAATTCTGAATGGAGCACTGAAAACACATGAACAACTAGTGATTTTGATAGAAAATGTTGATTCTGCTGATGCCCATTTCAAGAAGTTCCTTGCAGATGAATTTGAGACATTAAAGCTTGGAAATTTATGTAACAATGAGGAGAATTCATGCAATGCAATATTCATATTGAGTAATGATGGTTGCACTAAAAGAACCTATAATGAAAAGCATAACAAGGACTTTGTGATGAAACTTGTGTTGCAAGTTAGTGAAACCAAGTCTTCATTGGAGCCATCATCATCACCTTGCTTGAGCCACAAGAGAAATCTATCTCAACTTGATTTCTTTACCAAGATCAAGAAGGCAAGGATTGAAGAGAAAGAACAAGAAGGTGTTTTGGTTTGTGAAACAAAGAAAGAGTTTTCTACACAATCAAGCTTTAACACTCTTGACTTGAACATAAAAGCTCATGATAATGAAGAAGAAGAAGAAGAGGATTATGAAAAAAGTAGTTCAAATTCAAGTGATTCAACTAGAGAAATCATAGCTGATAATCTGAACTCAAATGGGTTTGTTAACTCAATTAAGAACAGATTTGAGTTAAACCAAAGTCCATCTAGGGAGAGGAAAATGAAAGACATGTTTCTGTTCAAAATCAAAGGTTCTTTTGAGGAAGTTTATGGTGTAATGAACTTTAGTGTAGAGAATAAGGTGATAGAGGAAATTGGTGTAAGTTGTGGTTCTTTTACTAATAGCATGTTTGAGAAATGGCTCAAAGACATTTTTCAAACAAGTTTAAGGATAGTTAACTTTGGTGGGAAGGAAAAGGAAAATGAGGGTATAGTTTTTACACTTTGTTGGGGTGGTAAAGGTGACAAAAAATGTCATAGTGGCTTCATGAGTTCATGTCTTCCCAAGAATATTCAAGTTAACTACTTCATGGATTGA 3105 0.3733 MRSGVCTLQQTLTAEAASILKHSLVLARRRGHAQVTPLHVAATLLSLRASSPFKRACLKSQPQFQTSSHPLHCKALELCFNVALNRLPTTQGPSFLQNQPSLSNALIAALKRAQAHHRRGCIEQHHHHQQQQPLLIVKVELEQLIISILDDPSVSRVMREAGFSSTDVKNNIEDNKTSTTTTTLTSSVFYNNSCGGVFSSPCSPSENQKKQHFLGSYTNSHEYSTPLMFPITHEEDMKVVLDILLGKNKKKNSVIVGDSLSLNEGLVDEIMRKFERREVPNELKTTNFIKFQFSSLSFMNKDEVKMNLSSLKKKVDSVISSGRGAIFYVGDLKWIVEGISYESVDVVVEEIGKLFSELRDSNTSKVCVMGTASYQTYMRCQMRQPPLETHWNLQVVPVPSGGLGLTLHAPSVYDSKMTNSHNPSQILETKLFSIKEEHDKLNCCEECDSNYEKEAVLFKPSHKKLLPSWLQSHSTEVHHKDEITQLKRKWNGLGHCLHQRKQPQSHWSNSLYENHSSNAKIYPYNSSYPWWPSQTSVFTDSSSISFADSAAARPAYSSNLVPHFKHQQSCTIEFSFINDVTDEKKEETTMLDSVKGIVEDKEVKVTLALGNSTYSDGSREKVESISDNTRLVQQAHICKMLQENVPWHSEKVSSISEALVLGCSKSAMQKSATWLFMHGNDYVGKTRLARAIAESFFGSVNDDKFLHLDMMIKTCDDLGTETQFSEILNGALKTHEQLVILIENVDSADAHFKKFLADEFETLKLGNLCNNEENSCNAIFILSNDGCTKRTYNEKHNKDFVMKLVLQVSETKSSLEPSSSPCLSHKRNLSQLDFFTKIKKARIEEKEQEGVLVCETKKEFSTQSSFNTLDLNIKAHDNEEEEEEDYEKSSSNSSDSTREIIADNLNSNGFVNSIKNRFELNQSPSRERKMKDMFLFKIKGSFEEVYGVMNFSVENKVIEEIGVSCGSFTNSMFEKWLKDIFQTSLRIVNFGGKEKENEGIVFTLCWGGKGDKKCHSGFMSSCLPKNIQVNYFMD* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0127 1034 MobiDBLite consensus disorder prediction 877 897 - -
Lan15g0127 1034 Gene3D - 612 845 IPR027417 -
Lan15g0127 1034 Gene3D - 9 178 IPR036628 -
Lan15g0127 1034 ProSiteProfiles Clp repeat (R) domain profile. 8 178 IPR004176 -
Lan15g0127 1034 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1009 - -
Lan15g0127 1034 SUPERFAMILY Double Clp-N motif 12 173 IPR036628 -
Lan15g0127 1034 PANTHER PROTEIN SMAX1-LIKE 5 1 1009 - -
Lan15g0127 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 782 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0127 Lan-Chr15 953601 957873 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0127 - - gmx:102660146 1212.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1019 12 16859418 16863589 Lan15g0127 15 953601 957873 PCT
Lan1g1253 1 22389298 22393124 Lan15g0127 15 953601 957873 PCT
Lan1g0397 1 3153998 3158019 Lan15g0127 15 953601 957873 PCT
Lan15g0127 15 953601 957873 Lan12g1019 12 16859418 16863589 PCT
Lan15g0127 15 953601 957873 Lan1g1253 1 22389298 22393124 PCT
Lan15g0127 15 953601 957873 Lan1g0397 1 3153998 3158019 PCT