Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0212 ATGGCATCAACCATAGCAACCATGGCAATGATCAAACCCATCAACCTTACAACACCACCAAGACCTACTTCCCTTCTTTCCATGCACACCCTCCCAAAGGCTCTAGCTTTCACAAAAGCATCTGAAAACACCAACATGCCCACTACTTCAATTACCATTGCAGGAAGTGCTATTGCTGGTGCTATTTTTGCATCACTTGGAAGCTGTGATGCTGCTTTTGCTGCACAACAGCTAGCTGAAATAGCAGAAGGTGGTAGTAGCGACAACCGCGGCATAGCACTTCTGCTACCTATAATTCCAGCCATAGCATGGGTGCTTTTCAACATTTTTCAGCCAGCACTTAACCAACTCAACCGAATGAGGAGCACCAAGGGTGTGATCATTGGTCTTGGTCTTGGTGGGTTGTTGGGTGCATCAGGTTTAGTTTCGGCACCGGATGCATCAGCTAGTGAAATGGCTGTGATTGCTGATGCTGCTGCAGCAGCAGCAGCAGGTAGTGATAATAGGGGTCAGCTTCTGCTGTTTGTGGTTACACCTGCTATTCTTTGGGTGCTTTACAACATTTTGCAGCCAGCTTTGAACCAGATCAACAAGATGAGATCCCGGTAG 609 0.4729 MASTIATMAMIKPINLTTPPRPTSLLSMHTLPKALAFTKASENTNMPTTSITIAGSAIAGAIFASLGSCDAAFAAQQLAEIAEGGSSDNRGIALLLPIIPAIAWVLFNIFQPALNQLNRMRSTKGVIIGLGLGGLLGASGLVSAPDASASEMAVIADAAAAAAAGSDNRGQLLLFVVTPAILWVLYNILQPALNQINKMRSR* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0212 202 Hamap Photosystem II protein Y [psbY]. 88 122 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Lan14g0212 202 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 201 - -
Lan14g0212 202 Pfam Photosystem II protein Y (PsbY) 88 120 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Lan14g0212 202 Pfam Photosystem II protein Y (PsbY) 167 199 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Lan14g0212 202 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 201 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0212 Lan-Chr14 2473034 2473936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0212 K02723 - vvi:100252545 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0212 14 2473034 2473936 Lan3g1453 3 26086675 26087623 LSH
Lan12g0588 12 12726409 12727295 Lan14g0212 14 2473034 2473936 PCT