LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan13g0381	ATGTATAAGAACCAGCTTCAGGAGCTGGCACAGCGAAGCTGTTTCAATCTCCCATCCTACACGTGCATTCGGGAAGGTCCCGATCACGCGCCGAGGTTCAAAGCCACCGTTAACTTCAACGGCGAGATCTTCGAGAGTCCTCACTACTGCACCACTCTGCGCCAGGCGGAGCACTCCGCCGCAGAGGTTGCCCTCAACTCCCTCTCCCACCGTGGACCTTCTCACTCCCTCGCCGCCAGAATCCTCGATGAGACGGGAGTCTACAAGAATCTCTTACAGGAAATTGCACAAAGGGTCGGGGCTCCATTACCACAGTACACAACATTCAGGTCAGGCCTAGGACACCTACCTGTTTTTACTGGGACGGTAGAATTGGCTGGAATCACATTCACCGGTGAACCTGCCAAGAATAAGAAACAAGCAGAGAAAAATGCAGCTATGGCAGCTTGGTCATCTCTAAAACAATTGGCTAAAGAAACTTCAAGCTCGTCAACTGAACCAGAGAACAATGACGAGCTAGAGCAGATCACAATAGCAAGAGCCTTAATAAATTATCGTTTGAAGGAAAAGATTTCAATGTCAAATCCAAATGCTTTGATTCCATTTCCGAAAAGGTTTCAGATTCAAAGTTGCAGGCCAACCAGCCCTCAACCTCGACCTGCCGCTACTTCAAAGATACTTCCCTTAATTTTCCCGAAGACAGTAACTCGAAGCAGACATTCCTTAACAACATCAAGTGAAAGTCCTCAAAGCAGGCATCCAGTAGCTGCTGCAGCTGCCAGTGACAATCCAATGATGTCACCTTTCTCTTGTACACATGAAAGCCGAGGGAGCCACCGCCCAAAGTTCCCTGCAGTAGGAGCAGCTCCTTATGTTCCCATTAGACAAATGAGATCACCTTGCCAGGGTATTGCGCCTCCGGTTACTATTAGGACTGCAGTGCCTGTATTCTCTGCACCACCGCTTCCACCACCAGCCATGATGTCCCATCAATTAATGCGGGCATCTCCTGTACGAGTTGCTCCATCAGTCAATATTCGGCAAGCTGTTCCAGTATACGCTGCTCCACCACCAGCTCAAAAAATTGAAACTGCTCCCATCCGAAAAGATGATCCACCAGCTGCTATTACTGTCCCTAGCCAGGTAGATAAACTACCTGCTACCAGCCCGGAGGATAAACTGCCTGCCATGAGCGATGAACTTAACCTACCTACTACAAGCCAGGATGATAAGGTGCCAGCCAAAAATCAGGAGACTGACACCAAAACTGAGAATGTTCCACCAGAATCCGAGACAGTGCAGAGCTTGGAACAGCTCAAAATTTGA	1326	0.4887	MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCTTLRQAEHSAAEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETSSSSTEPENNDELEQITIARALINYRLKEKISMSNPNALIPFPKRFQIQSCRPTSPQPRPAATSKILPLIFPKTVTRSRHSLTTSSESPQSRHPVAAAAASDNPMMSPFSCTHESRGSHRPKFPAVGAAPYVPIRQMRSPCQGIAPPVTIRTAVPVFSAPPLPPPAMMSHQLMRASPVRVAPSVNIRQAVPVYAAPPPAQKIETAPIRKDDPPAAITVPSQVDKLPATSPEDKLPAMSDELNLPTTSQDDKVPAKNQETDTKTENVPPESETVQSLEQLKI*	442

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan13g0381	441	PANTHER	-	1	441	-	-
	Lan13g0381	441	MobiDBLite	consensus disorder prediction	238	252	-	-
	Lan13g0381	441	MobiDBLite	consensus disorder prediction	363	441	-	-
	Lan13g0381	441	SUPERFAMILY	dsRNA-binding domain-like	2	68	-	-
	Lan13g0381	441	MobiDBLite	consensus disorder prediction	238	266	-	-
	Lan13g0381	441	MobiDBLite	consensus disorder prediction	426	441	-	-
	Lan13g0381	441	SMART	DRBM_3	88	154	IPR014720	-
	Lan13g0381	441	SMART	DRBM_3	2	69	IPR014720	-
	Lan13g0381	441	Pfam	Double-stranded RNA binding motif	2	68	IPR014720	-
	Lan13g0381	441	Pfam	Double-stranded RNA binding motif	88	153	IPR014720	-
	Lan13g0381	441	PANTHER	DOUBLE-STRANDED RNA-BINDING PROTEIN 2	1	441	-	-
	Lan13g0381	441	CDD	DSRM_AtDRB-like_rpt2	86	154	IPR044451	GO:0003725
	Lan13g0381	441	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	87	155	IPR014720	-
	Lan13g0381	441	CDD	DSRM_AtDRB-like_rpt1	1	69	IPR044450	GO:0003725
	Lan13g0381	441	ProSiteProfiles	Double stranded RNA-binding domain (dsRBD) profile.	1	70	IPR014720	-
	Lan13g0381	441	Gene3D	-	84	154	-	-
	Lan13g0381	441	Gene3D	-	2	83	-	-
	Lan13g0381	441	SUPERFAMILY	dsRNA-binding domain-like	88	158	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan13g0381	Lan-Chr13	2571848	2575503	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan13g0381	-		-	gmx:100816445	583.948

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan7g0301	7	1939695	1943633	Lan13g0381	13	2571848	2575503	LSH
	Lan8g1665	8	23622847	23626923	Lan13g0381	13	2571848	2575503	LSH