Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0368 ATGGCAAACAGAAACACCCTTTTGCTTTTGCTCCTTGTTATTATTATATGCAATGGAGTGGCCTTAACAATGGGTTCAGTTGAATATGAAGAAAGGAGGACAGTGAAAAAAGAAAGGAGGACAGTGAGAAAAGAAAGGCCTTCAAGTTCATCAGAGAGTAGTTTGTTCTTGATGCATGATTCCAAGAGTGTGGTGAAGACTGAAGCTGGGGAAATGATAGTGAAAAACTATGGTGGTGGGATTTTGGAGAGGCGCATGCATATTGGTTTCATCACTATGGAACCAAAATCACTATTCATTCCTCAGTACCTTGATTCCAATTTGGCAATATTCATCCGTAGAGGGGAAGCAAATTTGGGAGTGATATATAAAAATGATTTAGGGGAAAGGAGACTTAAAGCAGGGGATGTGTATATAATTCCAGCTGGTTCACCATTCTATTTGGTTAATGTATGGGAGGGTCAAAGACTTCACATTATTTGCAGCATTCAATCCCCACAGAGTTTTGCAGCAGATACCTTCCATTCCTTTTATTTAGGTGGAAGAGATTCAGTGCTTTCTGGATTCAGACCTGAAATCCTTGAAGCCGCATTTAATGCATCAAGAACTGAGGTAAGGAAAATCTTCAGCAAAGAAGTAGAAGGGCCAATTGTATATGTGGATGATTCTCATGCCCCTAGCCTATGGACCAAGTTCCTTGAACTCAAGAAGGAAGATAAAGTGCAACACATGAAGGGAATGTTGCAGTTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAACAAAGAAGTTGGTCATGGAGGAACGTGTTAGAAACATTGTTATTGGGGAGAGAGAGGAAGCACAAGGGTAAGGGTAAGGGCACTGGTGATTCCCCTGACTCAGTGAATCTGTATGACAGAAAACCAGATTTCAGAAACAATTATGGTTGGAGCATTGCTCTTGATGGAAGAGATTATGCTCCACTCAAAACAGCTCGTATTGGCATTTATCATGTCAATCTTACTGCGGGATCTATGATGGCACCCCATGTGAATCCATTAGCAACAGAATATGGCATAGTACTAAGTGGTTCTGGTAGAATTCAGATAGTGTTTCCAAACGGAACAAGTGCTATGAACACTGAGATCAAACAAGGGGACGTGTTCTTTGTACCTCGTTACTTCCCTTTTTGTCAAATAGCATCAAGAAATGGACCCTTAGAGTTCTTTGGGTTCGCCACCTCAGCCAGAAGGAACAGGCCACAGTTCCTGGCGGGTGCAGCCTCCATCTTAAGGACCATGATGGGTCCTGAGCTTGCGGCGGCGTTTGGGGTTGCCGAGGACACGATGCGGTGGGTGGTTGATGCTCAGCATGAGGCTGTGATATTGCCCTCACCATCTGCTGCACCGGGAGATGTAGATGATAAGCGAATGAGTATGAATGTTTTGGATGAGAGTGTTTAA 1449 0.4293 MANRNTLLLLLLVIIICNGVALTMGSVEYEERRTVKKERRTVRKERPSSSSESSLFLMHDSKSVVKTEAGEMIVKNYGGGILERRMHIGFITMEPKSLFIPQYLDSNLAIFIRRGEANLGVIYKNDLGERRLKAGDVYIIPAGSPFYLVNVWEGQRLHIICSIQSPQSFAADTFHSFYLGGRDSVLSGFRPEILEAAFNASRTEVRKIFSKEVEGPIVYVDDSHAPSLWTKFLELKKEDKVQHMKGMLQLEEEEEEEEEEEKQRSWSWRNVLETLLLGRERKHKGKGKGTGDSPDSVNLYDRKPDFRNNYGWSIALDGRDYAPLKTARIGIYHVNLTAGSMMAPHVNPLATEYGIVLSGSGRIQIVFPNGTSAMNTEIKQGDVFFVPRYFPFCQIASRNGPLEFFGFATSARRNRPQFLAGAASILRTMMGPELAAAFGVAEDTMRWVVDAQHEAVILPSPSAAPGDVDDKRMSMNVLDESV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0368 482 CDD cupin_7S_vicilin-like_N 64 228 - -
Lan13g0368 482 CDD cupin_7S_vicilin-like_C 304 455 - -
Lan13g0368 482 PANTHER OS03G0336100 PROTEIN-RELATED 1 467 - -
Lan13g0368 482 Coils Coil 240 264 - -
Lan13g0368 482 SMART Cupin_1_3 297 446 IPR006045 -
Lan13g0368 482 SMART Cupin_1_3 56 206 IPR006045 -
Lan13g0368 482 Gene3D Jelly Rolls 289 461 IPR014710 -
Lan13g0368 482 Pfam Cupin 298 444 IPR006045 -
Lan13g0368 482 Pfam Cupin 84 205 IPR006045 -
Lan13g0368 482 MobiDBLite consensus disorder prediction 281 300 - -
Lan13g0368 482 SUPERFAMILY RmlC-like cupins 58 455 IPR011051 -
Lan13g0368 482 Gene3D Jelly Rolls 46 232 IPR014710 -
Lan13g0368 482 PANTHER OS03G0336100 PROTEIN 1 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0368 Lan-Chr13 2461347 2464216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0368 50 468 Miscellaneous Gene Families AT2G18540 31.395 2.42e-48 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0368 - - gmx:100818796 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0124 10 764878 767810 Lan13g0368 13 2461347 2464216 PCT
Lan3g0075 3 504907 507698 Lan13g0368 13 2461347 2464216 PCT
Lan13g0368 13 2461347 2464216 Lan10g0124 10 764878 767810 PCT
Lan13g0368 13 2461347 2464216 Lan3g0075 3 504907 507698 PCT