Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0124 ATGGCTAACAGAACTACCCTTTTGGTATTGGTCCTTGTTCTTTGTCATGGAGTGGCTATGACAATGGGGTTCTGGAAGAAAGAGATGGAAAAGGAACAACATTGGCATCCAAAGCCAGATAAGTTGTTCTTGATGCAACACTTAAAGCGTATGGTGAAGACTGATGCTGGAGAAATGAGTGTGTTAGAAAGCTTTGGTGGTAGAATTATGGATAGGCGCTTAAACATTGGTTTCATTACTATGGAACCAAGATCACTCTTCATTCCTCAGTACCTTGATTCTACTTTCATTATATTTGTGCGTTCAGGGGAAGCAAAAGTGGGATTTGTGTATAAATCTAAGCTGGTGGAAAAGCATTTGAAGATGGGGGATGTGTATAGAATTCCATCTGGTTCTGCATTCTATTTGGTTAATACAATGGAGGATCAAACACTTCACATTATAAGCAGCATTGACCCTGCTGAGAGCATGGGAATCAGTGTTTTCCAGTCATTCTTTATTGGAGGAGGAGCCCAACCAGCATCAATACTTTCTGGATTTGAACCTAAAATCATTGAAACTGCTTTTAATGTATCAGGAGCAGAGCTGAAGAAAATCTTCACAAGGCAACATGAGGGACCAATTGTGCATTTGGATAGTTCACGTCCATCAAGCATATGGACCAAATTCCTTCAACTCAATGAGGAAGATAAACTACAACACCTTAAGAAAATGGTTGAAGACTGGGAAGAACATGACGATGACGACGATGTCGATGATGATGAAGAAGAAGAAGAACAACAACAACAAACAAGATTGTCATGGAGGAAGTTATTGGAAAGTGTGTTTAGGAATGAAAAGAAGGAGACAAAGGAAAAGGTTGCTCATAAATCTCATCACTCTTGCAACCTCTATGACAGGAAACCAGATTTCAAAAATGATTATGGTTGGAGTGTTGCTCTAGATGGCTCTGATTATCATCCACTCAAAAAATCTGGCATTGGAATTTATCATGTCACTCTTTCTGCTGGTTCCATGATGGCACCTCATGTAAATCCAAGGGCAACAGAATATGGCATAGTCCTAAAGGGTTCAGGTAGGATCCAAATTATATTTCCAAATGGAAGCAATGCAATGGACACTCATATAAAAGAAGGGGATGTGTTTTTTGTGCCAAGATACTTTCCATTTTGTCAAATAGCATCAAGGAATGGACCATTAGAGTTCTTTGGGTTCACCACCTCAGCTAGGAAGAATAGGCCACAGTTTCTGGTTGGTGCAACATCACTAATGAGAACAATGATGGGTCCTGAACTTGCAACTGCATTTGGGGTTAGTGAAGATACAATGAAACGCGTGGTTAATGCACAACATGAATCTGTGATACTACCAACTCCATGGGCTGAACAACATGCACATAATGCAAAGCAGAAAAAGAAGGAAGGTGAAACTAGACTTCCAAAGCTTATAAGGAATGGGGTGATTATGGGTTTTTGA 1476 0.3991 MANRTTLLVLVLVLCHGVAMTMGFWKKEMEKEQHWHPKPDKLFLMQHLKRMVKTDAGEMSVLESFGGRIMDRRLNIGFITMEPRSLFIPQYLDSTFIIFVRSGEAKVGFVYKSKLVEKHLKMGDVYRIPSGSAFYLVNTMEDQTLHIISSIDPAESMGISVFQSFFIGGGAQPASILSGFEPKIIETAFNVSGAELKKIFTRQHEGPIVHLDSSRPSSIWTKFLQLNEEDKLQHLKKMVEDWEEHDDDDDVDDDEEEEEQQQQTRLSWRKLLESVFRNEKKETKEKVAHKSHHSCNLYDRKPDFKNDYGWSVALDGSDYHPLKKSGIGIYHVTLSAGSMMAPHVNPRATEYGIVLKGSGRIQIIFPNGSNAMDTHIKEGDVFFVPRYFPFCQIASRNGPLEFFGFTTSARKNRPQFLVGATSLMRTMMGPELATAFGVSEDTMKRVVNAQHESVILPTPWAEQHAHNAKQKKKEGETRLPKLIRNGVIMGF* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0124 491 CDD cupin_7S_vicilin-like_C 302 453 - -
Lan10g0124 491 PANTHER OS03G0336100 PROTEIN 1 465 - -
Lan10g0124 491 Gene3D Jelly Rolls 30 220 IPR014710 -
Lan10g0124 491 MobiDBLite consensus disorder prediction 243 260 - -
Lan10g0124 491 SMART Cupin_1_3 46 197 IPR006045 -
Lan10g0124 491 SMART Cupin_1_3 295 444 IPR006045 -
Lan10g0124 491 CDD cupin_7S_vicilin-like_N 51 211 - -
Lan10g0124 491 Pfam Cupin 296 442 IPR006045 -
Lan10g0124 491 Pfam Cupin 78 195 IPR006045 -
Lan10g0124 491 SUPERFAMILY RmlC-like cupins 28 453 IPR011051 -
Lan10g0124 491 PANTHER OS03G0336100 PROTEIN-RELATED 1 465 - -
Lan10g0124 491 MobiDBLite consensus disorder prediction 242 264 - -
Lan10g0124 491 Gene3D Jelly Rolls 286 459 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0124 Lan-Chr10 764878 767810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0124 51 456 Miscellaneous Gene Families AT2G18540 29.343 4.61e-44 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0124 - - lang:109342739 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0124 10 764878 767810 Lan3g0075 3 504907 507698 LSH
Lan10g0124 10 764878 767810 Lan13g0368 13 2461347 2464216 PCT
Lan13g0368 13 2461347 2464216 Lan10g0124 10 764878 767810 PCT