Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0477 ATGGCATTCCTTAAACTCTTCTCAATCTACCTCACCCTCCTCCTCCTAATCTCTCCCTCACTTTCTCTCTCTCTTTCCTCTTCTTCTTCTTCTTCTTCTTCCATTCATGATCTTCTTCGTTCAAAAGGGTTACCAGCTGGACTATTACCAGAAGAGGTAAAGTCATATACTTTCTCAGAAGATGGTCACTTAGAAGTGTTCCTAGATGCACCTTGCTTGACCAAGTACGAGAATAGGGTTTTCTTTGAGCGTGTGGTCACTGCTAACCTAACCTATGGTAGCCTCATAGGTGTGGAGGGTGTCCAACAAGAAGAGCTTTTTGTATGGCTACCTGTTAAGGACATCATAGTTGATGATCCTTCATCAGGGTTGATACTCTTTGACATTGGCATTGCTTACAAACAGCTTTCTCTCTCTCTATTTGAAGATCCACCTCATTGCAACCCACAAGATGGGTTGAGGAATCATGTGAGGAAGGAAAAAGGATTCGAGGCCCTTAGATAG 504 0.4306 MAFLKLFSIYLTLLLLISPSLSLSLSSSSSSSSSIHDLLRSKGLPAGLLPEEVKSYTFSEDGHLEVFLDAPCLTKYENRVFFERVVTANLTYGSLIGVEGVQQEELFVWLPVKDIIVDDPSSGLILFDIGIAYKQLSLSLFEDPPHCNPQDGLRNHVRKEKGFEALR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0477 167 PANTHER T31J12.3 PROTEIN-RELATED 9 166 IPR007493 -
Lal9g0477 167 Gene3D - 21 149 IPR036758 -
Lal9g0477 167 Pfam Protein of unknown function, DUF538 36 142 IPR007493 -
Lal9g0477 167 PANTHER - 9 166 - -
Lal9g0477 167 SUPERFAMILY At5g01610-like 8 151 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0477 Lal-Chr9 3173486 3175299 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0477 - - lang:109338652 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0477 9 3173486 3175299 Lal9g0477 9 3173486 3175299 ECH
Lal1g0548 1 3524422 3526194 Lal9g0477 9 3173486 3175299 LSH
Lal2g0543 2 3265057 3267778 Lal9g0477 9 3173486 3175299 LSH