Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0548 ATGTTCCTTTCTCTTTTTGGTCCCAAAAATAACATGGCATACCTTAAACTCTTCACAACCATGTTCTCCTTCTCTCTCCTCCTCCTAGTCTCTGCCTCACTTTCTCTCTCCTCCTCTTCTTCTTCTTCTTCAATTCATGACCTTCTTCGTTCAAAAGGGTTACCAGCTGGACTGTTACCAGAAGAGGTAAAGTCGTACACTTTCTCAGAAGATGGTTGCTTAAAAGTGTTCCTAGATGCACCTTGCTTGACCAAGTATGAGAATAGGGTATTTTTTGAGCGTGTGGTCACTGCTAACCTCACCTATGGTAGTCTCATAGGTGTGGAGGGTCTTCAACAAGAAGAGCTTTTTGTATGGTTACCTGTTAAGGACATCATAGTTAATGATCCTTCATCAGGGTTGATACTATTTGACATTGGTCTTGCTTACAAGCAACTTTCTCTCTCTTTATTTGAAGATCCACCTCATTGCAAGCCACAAGATGGGTTGAGGAATCATGTGAGGAAGGAAAAAGGATTCGAGGCTCTTAGATAG 534 0.4176 MFLSLFGPKNNMAYLKLFTTMFSFSLLLLVSASLSLSSSSSSSSIHDLLRSKGLPAGLLPEEVKSYTFSEDGCLKVFLDAPCLTKYENRVFFERVVTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAYKQLSLSLFEDPPHCKPQDGLRNHVRKEKGFEALR 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0548 177 PANTHER - 17 176 - -
Lal1g0548 177 PANTHER T31J12.3 PROTEIN-RELATED 17 176 IPR007493 -
Lal1g0548 177 SUPERFAMILY At5g01610-like 12 161 IPR036758 -
Lal1g0548 177 Pfam Protein of unknown function, DUF538 46 152 IPR007493 -
Lal1g0548 177 Gene3D - 32 159 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0548 Lal-Chr1 3524422 3526194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0548 - - lang:109338652 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0548 1 3524422 3526194 Lal2g0543 2 3265057 3267778 LSH
Lal1g0548 1 3524422 3526194 Lal9g0477 9 3173486 3175299 LSH