Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0543 ATGGTATTCCTTAAACTCTTCACAACCTTGTTCTCCTTCTCTCTCTTCATCCTAATCTCTTTTCCATTTTCTCTCTCTTCTTCTTCTCCTTCTTCATCCATTCATGACCTTCTTCGTTCAAAGGGGTTACCAGCAGGTTTGTTACCAGAAGAGGTAAAGTCGTACACTTTCTCAGAAAATGGTCGCTTAGAAGTGTTCCTTGATGCACCTTGTTTGACAATGTACGAGAATAGGGTTCTCTTTGAACGTGAGATCACTGCTAACCTCACCTATGGTAGCCTCATAGGTGTGGAGGGTCTTCAGCAAGAAGAGCTTTTTCTGTGGCTACCTGTTAAGGATATCATAGTGAATGATCCTTCATCAGGGTTGATACTCTTTGACATTGGCCTTGCTTATAAACAGCTTTCTCTTTCTCTCTTTGAAGATCCACCTCATTGCAAACCACAAGGGTGTGAAGCCCGCAGAGGTGAATTGATCACTAAGGCCGACGAACCTATGCCACGAGTGGTGTTCGACATTGTTCCAACTTTTGAAGAAGCCAAGAAACCACCACTGAATTGA 561 0.4314 MVFLKLFTTLFSFSLFILISFPFSLSSSSPSSSIHDLLRSKGLPAGLLPEEVKSYTFSENGRLEVFLDAPCLTMYENRVLFEREITANLTYGSLIGVEGLQQEELFLWLPVKDIIVNDPSSGLILFDIGLAYKQLSLSLFEDPPHCKPQGCEARRGELITKADEPMPRVVFDIVPTFEEAKKPPLN 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0543 186 PANTHER T31J12.3 PROTEIN-RELATED 15 151 IPR007493 -
Lal2g0543 186 Pfam Protein of unknown function, DUF538 35 141 IPR007493 -
Lal2g0543 186 Gene3D - 23 147 IPR036758 -
Lal2g0543 186 PANTHER - 15 151 - -
Lal2g0543 186 SUPERFAMILY At5g01610-like 8 151 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0543 Lal-Chr2 3265057 3267778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0543 - - ccaj:109817891 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0548 1 3524422 3526194 Lal2g0543 2 3265057 3267778 LSH
Lal2g0543 2 3265057 3267778 Lal9g0477 9 3173486 3175299 LSH