Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0469 ATGTTTGAATTTAAAGATTGTGTATTTGAATATTCGGTGTTGAACCCTTTATTGTTGTTGTTGTGGGTAGCTGTTGTTTTCATCTCTTTGATTCTTGGGATGAGTAACAACAATGATGGCCAGAAACAGCAACACCTTCTCCATGGAGGTGTTGGTAATGGTGTCAGAGCCAACAGCAACAATAACAGCTTTCTTCCTGGATCCTTCCGCGCTTTCTCCAACTACCTGAAGATAGTTTCCTCTGGTGCCTCCACTGTTGCTCGGTCCGCAGCAGCCTCAGCTGCCTCGGTTGCGTCAGCCATTGTGGATAGGGATGGTCATGCTGACCATAATCAGGTTATATGGGCTGGGTTTGACAAGCTAGAGGGTGAAGGAGGAGTCATTTCGCAAGTCCTTCTTCTAGGATATCGGTCTGGCTTCCAAGTTTGGGATGTTGAGGACTCAAATAATGTTCGTGACCTAGTTTCCAGACAGGATGGTCCTGTTTCTTTTATGCAAATGGTACCAAGTCCAATTGTATCAAAGAGACCAGAAGACAAGTTTGCAGACAGGCGCCCATTGTTGGTAGTTTGTACAGATGGTTTCTTTGCTGGAGGAGGCAATGTTCAAGATGGTGTGACTCCCCCTTCCAATGGGGGTACTGCAAACTACCAAGAACAAGTGAATGGAAACTATCTACCAACTACTGTTCACTTTTATTCTATGAGGACCCAATCATATGTTCATGTACTAAAGTTTAGATCGGCTGTTTATTCTGTAAGATGCAGTTCTCGAATAGTTGCTGTTTCTCAAACCACGCAGATACACTGTTTTGATGCCACAACATTAGAGAGGGAATATATTTTACGTACCAATCCTATAGTCTTGAGTTGTCCTAGTTTTGGAGGCATTGGCTATGGACCACTTGCAGTAGGTCCTAGATGGCTGGCTTATAGTGGGAGCCCAGTTGCAGTTTCCACTTCTGGGCGTGTCAGCCCACAACATTTGACACCTTCTGCAAGCTTTCCTGGTTTTTCTTCAAATGGGAGTTTGGTTGCACACTATGCTAAAGAGTCTGGTAAGCATCTTGCTAGCAGGATTGTTACCCTCGGAGATATGGGGTATAAGAAACTTTCTAGATACTGCTCTGAGCTTCTCCCTGATAGCAATGATTATTTAAAACATATAAATTCTGCCTCAAGGAGTAATGGGGTCAGTAATGGCCATTCACCTGACGTGGATGATATTGGAATGGTCATTGTAAAAGATACAATCAGTAAAAATGTTGTATCCCAGTTCAGGGCCCACAACAGTCCTATTTCAGCCCTGTGCTTTGATCCTAGTGGCACCATATTAGTGACTGCTTCTGTTCAGGGGCATAACATTAATGTTTTTAAGATAATGCCTGGATGCGAGGTTTTGTCAGCATCTGATGCTAGCCCTTCTCACGTTCATCTCTACAGGCTGCAACGTGGTTTTACAAATGCGGTTATACAAGATATCAGTTTCAGTGTTGACAGCAAGTGGATAATGATTAGTTCCTCAAGGGGCACTAATCATCTATTTGCTATAAATCCTCAAGGAGGACCTGTAAATATCCAGCCATATGATGATAGTTTTACTGCAAACAATGGTGGATCGAATGTTATGACTAATCAAGCGGTTCACTTGCCTATACAAACTTATAAACAGCAAAGCCTCTGTGCTGGTGGCCCTCCGATCACACTTTCTGTTGTAAGCAGAATTAGGAGTGGATCTAATGGCTGGAGAGGCACAGTAACTGGTGCTGCTGCAGCAGCGACAGGTAGGATGAGTTCTCTTTCTGGGGCTGTTGCTGCGTCTTTCCACAATTTCAAAGGTAGCAGTGCCTTGTACGTTGAAGGAAACCATTCAAAGGAAAAGTATTACCTGTTGGTCTTTTCTCCCAGTGGTTCTATGGTACAATATGCTCTGCATTTACAGACCTTTAATGGTCTAGATTCAGTTGTAGTTTCTGGATTAGCACCTGCTTATGAACCGGCTCCACAAACTGATCCAAGAGTAATAGTTGATGCTATCCAGAAATGGAATATAAGTCAGAGAAATAGTTGGAGACAGCAAGCAGATAATATTGACATATATGGAGAGAATGGAATTTCTGGCTGCAATAAAATACATCCAGAGGAAGAGAAGGGTGATAATATCACTACCCCTAAAATCAAGAATGTCCTGAAAGTGAATTCCTGTCCTAAGGAAGAGCATAATTTGTATATTTCAGAAGCGGAACTGCAAATGCATGAAGCTGGTACTCCATTGTGGGCGAAGGCTGAGATATATTTTCATTCAATGAGTAAAGAGGTTGTCATGATGATGAATGAGGAAGCTGCTTCAGGAGGGGAAACTGAGATTGAAAGGGTTCCAACTCGCATGATTGAAGCTAGGTCAAAAGACTTAGTTCCAATTTTTGACTATATACAGACCCCAAAATTTCAGCATACAAGGACTCCTGCTGTGGAGAACAAGTTAGATGAACAAATGTTGCATCAAAGTTCTGGATTGTTTGAAAGGTGCAGCCCTTCATCCAGTAGCATTTTTGGATCTCCTGAGTATATGATTACATCTGTTGGTGCTATTGATGAATTTAAAAGTGGGTTTGAAAGAAATGAGTGGGATGATAATTTGATTCCAGCAGAAACAAAGGGCTTTGAAAATAACAATGACACCCTTAAACCAAATACTATGCATGAGATTGTAAATAATAAAATAGAGCACTTAAACATGGAGGCTCAACTCATGTTTGTAAATAGTGACAATGAAAGCCTGAAAATGAAGAATCCCTTTGAAGAAAAAGGAGATGAATCTGATTAA 2826 0.4168 MFEFKDCVFEYSVLNPLLLLLWVAVVFISLILGMSNNNDGQKQQHLLHGGVGNGVRANSNNNSFLPGSFRAFSNYLKIVSSGASTVARSAAASAASVASAIVDRDGHADHNQVIWAGFDKLEGEGGVISQVLLLGYRSGFQVWDVEDSNNVRDLVSRQDGPVSFMQMVPSPIVSKRPEDKFADRRPLLVVCTDGFFAGGGNVQDGVTPPSNGGTANYQEQVNGNYLPTTVHFYSMRTQSYVHVLKFRSAVYSVRCSSRIVAVSQTTQIHCFDATTLEREYILRTNPIVLSCPSFGGIGYGPLAVGPRWLAYSGSPVAVSTSGRVSPQHLTPSASFPGFSSNGSLVAHYAKESGKHLASRIVTLGDMGYKKLSRYCSELLPDSNDYLKHINSASRSNGVSNGHSPDVDDIGMVIVKDTISKNVVSQFRAHNSPISALCFDPSGTILVTASVQGHNINVFKIMPGCEVLSASDASPSHVHLYRLQRGFTNAVIQDISFSVDSKWIMISSSRGTNHLFAINPQGGPVNIQPYDDSFTANNGGSNVMTNQAVHLPIQTYKQQSLCAGGPPITLSVVSRIRSGSNGWRGTVTGAAAAATGRMSSLSGAVAASFHNFKGSSALYVEGNHSKEKYYLLVFSPSGSMVQYALHLQTFNGLDSVVVSGLAPAYEPAPQTDPRVIVDAIQKWNISQRNSWRQQADNIDIYGENGISGCNKIHPEEEKGDNITTPKIKNVLKVNSCPKEEHNLYISEAELQMHEAGTPLWAKAEIYFHSMSKEVVMMMNEEAASGGETEIERVPTRMIEARSKDLVPIFDYIQTPKFQHTRTPAVENKLDEQMLHQSSGLFERCSPSSSSIFGSPEYMITSVGAIDEFKSGFERNEWDDNLIPAETKGFENNNDTLKPNTMHEIVNNKIEHLNMEAQLMFVNSDNESLKMKNPFEEKGDESD 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0469 941 SUPERFAMILY WD40 repeat-like 130 518 IPR036322 GO:0005515
Lal9g0469 941 Gene3D - 118 535 IPR015943 GO:0005515
Lal9g0469 941 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 47 907 IPR045142 GO:0006914
Lal9g0469 941 Pfam Breast carcinoma amplified sequence 3 564 806 IPR022175 -
Lal9g0469 941 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 47 907 - -
Lal9g0469 941 SMART WD40_4 237 272 IPR001680 GO:0005515
Lal9g0469 941 SMART WD40_4 419 459 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0469 Lal-Chr9 3113870 3121394 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0469 - - var:108340445 1214.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0469 9 3113870 3121394 Lal9g0469 9 3113870 3121394 ECH
Lal2g0533 2 3220145 3221404 Lal9g0469 9 3113870 3121394 LSH
Lal10g0650 10 14316084 14322021 Lal9g0469 9 3113870 3121394 PCT
Lal8g0863 8 6277282 6283983 Lal9g0469 9 3113870 3121394 PCT
Lal9g0469 9 3113870 3121394 Lal10g0650 10 14316084 14322021 PCT
Lal9g0469 9 3113870 3121394 Lal8g0863 8 6277282 6283983 PCT