Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0863 ATGGGAATGAAGAATGATGGACAGAAACAACAAAAGCTTCTTCGTCAGGGTAATAGTGGTGGTAGAACCAATGGTTTTATTCCGAACTCGTTTCGTACCATATCCAGCTACCTGAGGATTGTTTCCTCCGGTGCTTCCACGGTTGCACGCTCTGCTGCATCGGTTGCTTCGTCGATTGTGGATAAGGATGATGATGATGCTGACAACGATCATGTTATCTGGGCTGGTTTTGACAAGTTGGAGTGTGAGGGTGAAATCATTCAACGAGTACTTCTTCTAGGCTATCGCTATGGCTTCCAGGTATGGCATGTTGATGAATCAAATAATGTCCACGACCTAGTTTCCAGACACGATGGTCCTGTTTCTTTCATGCAAGTGGTACCAAATCCAATCAGATCAAAGAGATCAGAAGACAAGTTTGCAAACAGCCGCCCGCTGTTGGTAGTTTGTACTGATGGGTTCTTTGCTGATGGCAGCAACGTTCAGGATGTGAATTGGAGCACTCCGAATTCCCATGACCAAGTCAATTGCAACTATCTGCCAACTACTGTTCAGTTTTATTCTATGAAATCCCAGTCATATGTTCATGTACTTAAGTTTAGATCAGTTGTTTATTCTGTAAGGTGCAGTCCTCGAATAGTTGTCGTTTCTCAATCCACTCAGATACACTGTTTTAATGCTACAACGTTAGAAAGGGAATATACTTTACTTACTAATCCTATAGTCATGAGCTGTCCTGGTTCTGGAGACATGGGCTATGGACCACTTGCGGTGGGTCCAAGATGGCTGGCTTACAGTGGAAGCCCCGTTGCAGTCTCCGCTTCTGGGTGTGTCAGCCCACAACATTTGACACCTTCAAGTTTCCCTGGTTTTTCTTCAAATGGGAGCTTGATTGCACACTATGCCAAAGAGTCCAGCAAGAATCTGGCTTCTGGGATTGTGACCCTTGGAGATATGGGGTATAAGAAAATTTCCAAATACTACTCTGATAGCAATGGTTCATTGCAACCTATAAATTCTGGAAATGGAACCATCAACGGCCATTCAACGGATGCTGATAACATTGGAATGGTCATCGTTAGAGATATTGTCACTAAAAAGATTGTTTCCCAATTCCAAGCCCACAAGAGTCCTATTTCAGCCTTATGCTTTGATCCTAGCGGCACCATATTAGTGACCGCTTCCGTTCAGGGGCATAATATAAATGTTTTTAAGATAATGCCTGGACATGAGCATATGTCAGCATCTGATGCCGGTACTTCTCATGTTCATCTCTACAGGCTGCAACGTGGCTTTACAAATGCGGTTATACAAGATATCAGTTTTAGTAATGACAGCAAGTGGATTATGATTAGTTCCTCACGGGGTACTAACCATCTATTTGCCATCAATCCACAAGGAGGAAATGTAAATGTCCAATCTTATGATGATAGTTATATAGCAAAAAATAGTGGGTTAGGTGTAACGGCTAATCAAGCAGTTCGCCGGCCCCATAGTTCAGCCTCACAAATGCCTCAGCAGCAAAGCATGTTTGCTGCTGGCCCTCCAATAACACTTTCTGTTGTAAGTAGAATTAGGAATGGAGCTAATGGCTGGAAAGGCGCTGTAAGTGGTGCTGCGGCAGCTGCAACTGGTAAGAAGAGTTCCCTTTCCGGTGCTATTGCTTCATCTTTCCTAAACTGCTATGGCAGTGGTGCCATGCATGTTGAAGGTAACCATGCGAAGGCAAACTATCGTCTATTGGTCTTTTCACCCACTGGGACCATGATACAATATGCTCTACGGACATTGAATGGCCAAGATTCAGCTGTTATATCTCGAATAGCTCCTGCTTATGAATCTATTCCACAGCCGGATTCAAGATTAGTAGTTGAGGCTACCCATAAATGGAATATATGTCAAAGACATAGTCGACAAGTAGAAGATAATGTTGACATATATGGTGAAAGTGGAATTCCAGACAGCAATAAAATTTATCCTGAGGATGTGAAGGAAGATGGTGTCAGTAGCCCTAAAATCAAGAATGTAGTCTTGAAAGGGAATTCTGATTCTCGTGAGGAACAGCATCATTTGTATATTTCAGAAGCTGAACTACAAATGCATCAAACTCAGGCACCATTGTGGGCAAAGCCAGAGATATATTTTCATCCAATGTTGGAAGAGTCTACAATAATGGATGAAGAAGCTGGGTCAGGAGGTGAGTTCGAGATTGAAAGCATTCCAACTCGCATGATTGAAGCGAAGTCAAAAGTTTTGGTTCCAATTGTTGACTACATTCAGAGGTCAAAACTACAGCAAACAAGGAATCCTGCTATTGATGGCAGGATTGATGAACAATTGTTGCGTCAGAATTCCCAGCTGTTCGGAAATGGAAGGATTTCACCGAGGACTAACTTTGGATCTCCTGAGAGCATGACTAATTCTGGTGGTGCTGTTACTGAAGTTAATAATGGGATTGAAGCAGGAACTGAGTGGCATGATCATTTAGCACTGCCCAAAATGATGGGTTATGTTAATAACAATCACACCCTTAAACCACGTACTCAGAATGAAATTGTAAATAATAGAATGGATCACTTAAACATGGAGGCTCAATTCATGTCTGTAAATAGTGACAGAAGGCCTGAAAGTGAAGAATCATATTTTGAAGAGAAAAGAGATGAATTTTATTGA 2673 0.4216 MGMKNDGQKQQKLLRQGNSGGRTNGFIPNSFRTISSYLRIVSSGASTVARSAASVASSIVDKDDDDADNDHVIWAGFDKLECEGEIIQRVLLLGYRYGFQVWHVDESNNVHDLVSRHDGPVSFMQVVPNPIRSKRSEDKFANSRPLLVVCTDGFFADGSNVQDVNWSTPNSHDQVNCNYLPTTVQFYSMKSQSYVHVLKFRSVVYSVRCSPRIVVVSQSTQIHCFNATTLEREYTLLTNPIVMSCPGSGDMGYGPLAVGPRWLAYSGSPVAVSASGCVSPQHLTPSSFPGFSSNGSLIAHYAKESSKNLASGIVTLGDMGYKKISKYYSDSNGSLQPINSGNGTINGHSTDADNIGMVIVRDIVTKKIVSQFQAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPGHEHMSASDAGTSHVHLYRLQRGFTNAVIQDISFSNDSKWIMISSSRGTNHLFAINPQGGNVNVQSYDDSYIAKNSGLGVTANQAVRRPHSSASQMPQQQSMFAAGPPITLSVVSRIRNGANGWKGAVSGAAAAATGKKSSLSGAIASSFLNCYGSGAMHVEGNHAKANYRLLVFSPTGTMIQYALRTLNGQDSAVISRIAPAYESIPQPDSRLVVEATHKWNICQRHSRQVEDNVDIYGESGIPDSNKIYPEDVKEDGVSSPKIKNVVLKGNSDSREEQHHLYISEAELQMHQTQAPLWAKPEIYFHPMLEESTIMDEEAGSGGEFEIESIPTRMIEAKSKVLVPIVDYIQRSKLQQTRNPAIDGRIDEQLLRQNSQLFGNGRISPRTNFGSPESMTNSGGAVTEVNNGIEAGTEWHDHLALPKMMGYVNNNHTLKPRTQNEIVNNRMDHLNMEAQFMSVNSDRRPESEESYFEEKRDEFY 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0863 890 MobiDBLite consensus disorder prediction 868 890 - -
Lal8g0863 890 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 3 857 - -
Lal8g0863 890 SUPERFAMILY WD40 repeat-like 96 464 IPR036322 GO:0005515
Lal8g0863 890 Pfam Breast carcinoma amplified sequence 3 514 754 IPR022175 -
Lal8g0863 890 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 3 857 IPR045142 GO:0006914
Lal8g0863 890 Pfam WD domain, G-beta repeat 369 398 IPR001680 GO:0005515
Lal8g0863 890 SMART WD40_4 365 405 IPR001680 GO:0005515
Lal8g0863 890 SMART WD40_4 191 226 IPR001680 GO:0005515
Lal8g0863 890 MobiDBLite consensus disorder prediction 1 26 - -
Lal8g0863 890 Gene3D - 88 481 IPR015943 GO:0005515
Lal8g0863 890 MobiDBLite consensus disorder prediction 9 26 - -
Lal8g0863 890 MobiDBLite consensus disorder prediction 872 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0863 Lal-Chr8 6277282 6283983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0863 - - gmx:100784596 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0650 10 14316084 14322021 Lal8g0863 8 6277282 6283983 LSH
Lal8g0863 8 6277282 6283983 Lal2g0533 2 3220145 3221404 PCT
Lal8g0863 8 6277282 6283983 Lal9g0469 9 3113870 3121394 PCT
Lal2g0533 2 3220145 3221404 Lal8g0863 8 6277282 6283983 PCT
Lal9g0469 9 3113870 3121394 Lal8g0863 8 6277282 6283983 PCT