Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0384 ATGGATTCTAATTCTGTTCATGACCATGTTGATCAACCTTTGTTAATCCCTAGTGAAATTCCACCACCTTCATTAACTCAATCATTCAGCTCAAATCATGAATCAAATGGTGAGCTTGAGAGAATACTCTCAGACACAAGTGTTCCTCTACTCAAGCGTTTTGGACTTGCTACATGGATTGAATTCAAGCTCCTCTTTTTTCTTGCTGCTCCTGCTGTTATTGTGTACCTTATCAACTATATCATGTCTATGTCTACACAAATCTTCTCTGGTCACCTTGGTAATCTTGAACTTGCTGCTGCTTCTCTTGGTAACACTGGTATTCAAGTCTTTGCTTATGGCCTCATGTTGGGTATGGGAAGTGCTGTTGAGACTCTATGTGGACAAGCATATGGAGCACAAAAGTTGGAAATGTTAGGCATATATTTACAAAGATCAACTGTTCTTCTCACATTGGCTGGTGTTATTTTAACTGTGATATATGTCTTCTCCAAACCAATTTTAATATTTTTAGGGGAGTCTCCAAGAATTGCATCAGCAGCTTCACTTTTTGTCTTTGGCCTAATACCTCAAATATTTGCCTATGCTGCAAACTTCCCTATTCAGAAGTTTCTTCAATCTCAAAGCATAGTGGCTCCAAGTGCATATATATCAACAGCAACATTATTCATACACATATTGTTAAGTTGGGTGGCTGTGTATAAAATTGGACTTGGTTTATTAGGTGCATCATTGGTTTTGAGCTTGTCATGGTGGATCATTGTGATTGCACAGTTTGTGTATATTGTGAAGAGTGAAAGGTGTAAGAGGACATGGAGAGGGTTCACAGTGCAAGCATTTTCAGGGTTGCCAGAGTTTTTCAAGTTATCAGCAGCATCAGCAGTTATGCTGTGTTTGGAAACATGGTACTTTCAAATTTTGGTTTTGCTTGCTGGGTTGCTTCCTAACCCTGAGATTGCTCTTGATTCACTTTCCATTTGCACTACTGTGTCTGGATGGGTGTTCATGATCTCAGTTGGATTTAATGCAGCTGCAAGTGTGAGAGTGAGCAACGAGCTAGGAGCCAAAAATCCAAAATCAGCCTCATTTTCAGTACTGATTGTGACATTGATTTCTTTCATAATATCGGCTATTATAGCACTTGTGGTGCTTGCATTAAGGGATGTTATCAGCTATGTCTTCACAGAGGGTGAAGTGGTTGCTGCTGCTGTTTCAGATCTTTGTCCCCTCTTATCTCTCGCAATTCTCCTCAATGGCATTCAGCCTGTCTTATCTGGGGTGGCTGTTGGATGCGGTTGGCAAACATTTGTTGCCTATGTAAACGTTGGTTGTTATTATGGAATTGGCATACCATTGGGTTCGGTTCTAGGTTTCTATTTCAATCTTGGTGCTAAGGGAATATGGTTGGGAATGCTAGGTGGCACGGTTTTGCAAACAATTATTTTAATGTGGGTCACATTTCGAACGGATTGGAATAAAGAGGTTGAAGAAGCAGCCAAGAGGTTGAACAAATGGGAAGACAAGACCGAGCCACTTCTAAAGAACTGA 1548 0.4037 MDSNSVHDHVDQPLLIPSEIPPPSLTQSFSSNHESNGELERILSDTSVPLLKRFGLATWIEFKLLFFLAAPAVIVYLINYIMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMLGMGSAVETLCGQAYGAQKLEMLGIYLQRSTVLLTLAGVILTVIYVFSKPILIFLGESPRIASAASLFVFGLIPQIFAYAANFPIQKFLQSQSIVAPSAYISTATLFIHILLSWVAVYKIGLGLLGASLVLSLSWWIIVIAQFVYIVKSERCKRTWRGFTVQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPNPEIALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGAKNPKSASFSVLIVTLISFIISAIIALVVLALRDVISYVFTEGEVVAAAVSDLCPLLSLAILLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGIGIPLGSVLGFYFNLGAKGIWLGMLGGTVLQTIILMWVTFRTDWNKEVEEAAKRLNKWEDKTEPLLKN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0384 515 TIGRFAM matE: MATE efflux family protein 71 468 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal9g0384 515 CDD MATE_eukaryotic 61 497 IPR045069 GO:0042910|GO:1990961
Lal9g0384 515 PANTHER MULTIDRUG RESISTANCE PROTEIN 17 502 - -
Lal9g0384 515 Coils Coil 488 508 - -
Lal9g0384 515 PANTHER PROTEIN DETOXIFICATION 17 502 - -
Lal9g0384 515 MobiDBLite consensus disorder prediction 1 32 - -
Lal9g0384 515 Coils Coil 513 515 - -
Lal9g0384 515 Pfam MatE 71 231 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal9g0384 515 Pfam MatE 293 453 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0384 Lal-Chr9 2534259 2541441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0384 K03327 - gmx:100801718 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0384 9 2534259 2541441 Lal9g0384 9 2534259 2541441 ECH
Lal25g0049 25 358749 364461 Lal9g0384 9 2534259 2541441 PCT
Lal8g0037 8 331612 336794 Lal9g0384 9 2534259 2541441 PCT
Lal9g0384 9 2534259 2541441 Lal25g0049 25 358749 364461 PCT
Lal9g0384 9 2534259 2541441 Lal8g0037 8 331612 336794 PCT