Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0049 GCAGAAGGGTTCTCACTCCGCACCACCACAATAACATCAAAAGCATTTGAAGACAAAATTTCACAACCAAACTCCAAAAACTGTACTCCAATGGCTTCTGTAGATGCTAATCAACCATTGTTACCCAACCATGATCAGCAAAATGAACTTGAAAATATACTCTCCAACACTACCTTGCCTTTCCTCACTCGTCTTGGAAAAGCCTTATGCATCGAATTGAAGCTTCTCTTCTTCTTAGCTGCTCCTGCTATTGTTGTTTATCTCATCAACTATCTCATGTCTATGTCCACCCAAATCTTCTCTGGTCACCTTGGTAATCTTGAACTTGCCGCGGCTTCACTTGGAAACTCCGGCGTCCAAATCTTTGCCTATGGCCTCATGTTAGGAATGGGGAGTGCAGTTGAGACTTTATGTGGACAAGCATTTGGTGCTAACAAGTTGGAAATGCTAGGCATATACTTGCAAAGATCAACAGTGCTTCTGTCATTGGCAGGTGTTGTTTTAACAGTGATATATGCCTTTAGTGAACCAATTTTAATATTTCTAGGACAAGCTCCAAATATTGCATCAGCTGCTGCATTATTTGTGTATGGCCTAATCCCTCAAATCTTTGCATATGCTGTGAATTTCCCAATTCAAAAGTTTCTTCAATCACAAAGCATAGTGGCACCAAGTGCATACATATCAGCAGCCACATTAGTGGTGCACTTTTTGTTGAATTGGTTGGTTGTGTACAAGGTTAGGCTTGGTTTATTAGGTGCCTCATTGGTGTTGAGTATTTCATGGTGGATCATTGTGATTGCACAATTTGTGTACATTGTGAAGAGTGAAAGGTGTAAGAATACATGGCAAGGATTCTCATGGGAAGCATTTACTGGTTTACCTGAATTTTTCAAGTTGTCAGCAGCATCTGCAGTTATGCTTTGCCTAGAGACTTGGTACTTTCAGATTTTGGTTTTACTTGCTGGGTTGCTTCCTCATCCTGAGTTGGCTCTTGATTCTCTTTCTATTGTTACCACAGTTTCCGGATGGGTATTCATGATATCAGTTGGATTTAACGCAGCTGCAAGTGTGAGAGTGAGCAATGAACTAGGAGCAGGGAATCCAAAATCAGTGTCATTTTCTGCAATAGTGGTCACATTCATTTCTTTCATCATATCAATCATTATAGGACTTGTGGTGATTGCATTAAGAGATGTTATTAGCTATGCCTTCACAGAAGGTGAAGAAGTTGCTGCAGCAGTCTCAGATCTTTGTCCATTGCTAGCACTTTCTATTGTCCTCAATGGCATTCAACCCGTTTTATCAGGTGTGGCTGTGGGATGTGGATGGCAAACTTTCGTGGCCTATGTAAATGTGGGTTGTTATTATGGAGTTGGTATACCATTTGGTGCGTTTCTTGGCTTTTATTTCAATTTTGGTGCTAAGGGAATATGGCTGGGAATGCTAAGTGGCACAGCTATGCAAACATTGATTCTAATTTGGGTCACATTTCGAACAGATTGGAATAAGGAGGTAGAAAATGCAGCTAAGAGGTTGAACAAATGGGAGAACAAGAAGGAGACACTTCTTTTAAACTAA 1581 0.4061 AEGFSLRTTTITSKAFEDKISQPNSKNCTPMASVDANQPLLPNHDQQNELENILSNTTLPFLTRLGKALCIELKLLFFLAAPAIVVYLINYLMSMSTQIFSGHLGNLELAAASLGNSGVQIFAYGLMLGMGSAVETLCGQAFGANKLEMLGIYLQRSTVLLSLAGVVLTVIYAFSEPILIFLGQAPNIASAAALFVYGLIPQIFAYAVNFPIQKFLQSQSIVAPSAYISAATLVVHFLLNWLVVYKVRLGLLGASLVLSISWWIIVIAQFVYIVKSERCKNTWQGFSWEAFTGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSIVTTVSGWVFMISVGFNAAASVRVSNELGAGNPKSVSFSAIVVTFISFIISIIIGLVVIALRDVISYAFTEGEEVAAAVSDLCPLLALSIVLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGVGIPFGAFLGFYFNFGAKGIWLGMLSGTAMQTLILIWVTFRTDWNKEVENAAKRLNKWENKKETLLLN 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0049 526 PANTHER MULTIDRUG RESISTANCE PROTEIN 43 513 - -
Lal25g0049 526 Coils Coil 499 526 - -
Lal25g0049 526 TIGRFAM matE: MATE efflux family protein 82 479 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal25g0049 526 CDD MATE_eukaryotic 72 508 IPR045069 GO:0042910|GO:1990961
Lal25g0049 526 Pfam MatE 82 242 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal25g0049 526 Pfam MatE 304 464 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal25g0049 526 PANTHER PROTEIN DETOXIFICATION 43 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0049 Lal-Chr25 358749 364461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0049 K03327 - gmx:100801718 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0049 25 358749 364461 Lal25g0049 25 358749 364461 ECH
Lal25g0049 25 358749 364461 Lal8g0037 8 331612 336794 LSH
Lal25g0049 25 358749 364461 Lal9g0384 9 2534259 2541441 PCT
Lal9g0384 9 2534259 2541441 Lal25g0049 25 358749 364461 PCT