Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0037 ATGGGTTCTGTTGATGGTCATGATGAACCACTCTTATTGAACCATAACAATGATCATCAACAAAATGAACTTGAAAACATACTCTCCAACACCACCTTGCCTGTCCAAACTCGTCTTAGGAAAGCCTTATGGATTGAATTGAAGTATCTCTTCTTCTTGGCTGCTCCTGCTGTTGTTGTTTATATGATCAACTATATCATGTCCATGTCCACCCAAATCTTCTCTGGCCACCTTGGTAATCTTGAACTCGCTGCCGCTTCTCTTGGCAACACTGGCATCCAAATCTTTGCGTACGGCCTCATGTTGGGTATGGGAAGTGCAGTTGAGACACTATGTGGACAAGCATTTGGTGCTAACAAGTTTGAAATGCTAGGCATATACATGCAAAGATCAGCAGTTCTTCTCTCATTGACTGGTGTTGTTTTAACAGTGATATATGTGTTCAGTGGACCAATTTTAGTCTTTATTGGACAAGCTCCAAACATTGCATATGCTGCTGCTTTATTTGTGTATGGCTTAATACCTCAAATATTTGCATATGCTGTAAATTTTCCAATTCAAAAGTTTCTTCAAGCACAAAGCATAGTGGCTCCAAGTGCATACATATCAGCAGCCACATTAGTAGTGCACCTCTTGTTGAGTTGGTTGGCAGTATACAAGGTTGGACTTGGTTTACTAGGTGCCTCATTGGTGTTGAGTATTTCATGGTGGATAATTGTGATTGCACAATTTGTGTACATTTTGAAGAGTGAAAAGTGTAAGAAAACATGGCAAGGGTTCTCATGGGAAGCCTTTACTGGATTGCCTGAATTTTTCAAATTGTCAGCAGCATCTGCAATTATGTTATGCCTTGAAACTTGGTACTATCAGGTTCTGGTTTTGCTAGCTGGGTTGCTTCCTCACCCTGAGTTGGCTCTTGATTCCCTTTCTATTTGTACCACAATTATGGGATGGGTGTTCATGATCTCGGTTGGATTCAATGCAGCTGCAAGTGTGAGAGTGAGCAACGAATTAGGAGCAAAGAATCCAAGATCAGCGTCATTTGCAGTGGTGGTGGTGACTGTGATATCTTTCATCATATCAGTTATTGCAGCAATCATAGTTCTTCTAATAAGAGATGTCATTAGTTATCTCTTCACAGAAGGTGAAGAAGTTGCTGCAGCTGTCTCAGATCTTTGTCCATTACTTGCACTCTCTCTTATACTCAATGGCATTCAACCTGTCTTATCTGGGGTGGCTGTTGGTTGTGGATGGCAAAGTTTTGTGGCTTATGTAAACGTAGGTTGTTATTATGTTGTTGGCATACCACTGGGTTCAGTTCTCGGCTTTTATTTCAAGTTTGGTGCTAAGGGAATATGGTTGGGAATGTTAGGTGGCACAACCATGCAAACGATTATTCTAATATGGGTCACATTCCGAACAGATTGGAATAAGGAGGTAAAAGATGCAGCTAAGAGGTTGAACAAATGGGAGACCAGGGATGATAAACTTGTTCAAAACTAA 1503 0.4085 MGSVDGHDEPLLLNHNNDHQQNELENILSNTTLPVQTRLRKALWIELKYLFFLAAPAVVVYMINYIMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGANKFEMLGIYMQRSAVLLSLTGVVLTVIYVFSGPILVFIGQAPNIAYAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISAATLVVHLLLSWLAVYKVGLGLLGASLVLSISWWIIVIAQFVYILKSEKCKKTWQGFSWEAFTGLPEFFKLSAASAIMLCLETWYYQVLVLLAGLLPHPELALDSLSICTTIMGWVFMISVGFNAAASVRVSNELGAKNPRSASFAVVVVTVISFIISVIAAIIVLLIRDVISYLFTEGEEVAAAVSDLCPLLALSLILNGIQPVLSGVAVGCGWQSFVAYVNVGCYYVVGIPLGSVLGFYFKFGAKGIWLGMLGGTTMQTIILIWVTFRTDWNKEVKDAAKRLNKWETRDDKLVQN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0037 500 Pfam MatE 278 438 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal8g0037 500 Pfam MatE 56 216 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal8g0037 500 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 487 - -
Lal8g0037 500 CDD MATE_eukaryotic 46 482 IPR045069 GO:0042910|GO:1990961
Lal8g0037 500 TIGRFAM matE: MATE efflux family protein 56 453 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal8g0037 500 PANTHER PROTEIN DETOXIFICATION 40 15 487 - -
Lal8g0037 500 Coils Coil 473 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0037 Lal-Chr8 331612 336794 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0037 K03327 - gmx:100801718 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0049 25 358749 364461 Lal8g0037 8 331612 336794 LSH
Lal8g0037 8 331612 336794 Lal9g0384 9 2534259 2541441 PCT
Lal9g0384 9 2534259 2541441 Lal8g0037 8 331612 336794 PCT