Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0321 ATGGAGTTGGGAAGCATACTCCACTTCCTTGAAAACAAGTCCATTTTAATCACTGGTGCAACTGGTTTTCTAGCCAAAATTTTGTTGGAGAAGATATTGAGGGTTCAGCCAAATGTTAAGAAGCTTTATCTTCTTTTAAGAGCTGCTGATACAGAATCTGCTACTCATCGCTTACACAATGAGATCATAGGGAAGGACTTATTTAAATTGCTAAAGGAAAAAATGGGTGCAAATTTCAATTCCTTCCTTTTGGAAAAGTTGACACTTGTGCCTGGAGATATTTCTCGTGAAGGATTGGGTTTGGAAGATTATATTCTAAGGGGAGAGATTTACAATCAAACAGATGTTATTATTAATTTAGCTGCTACCACTAACTTTGATGAAAGGTATGATATATCCTTGAGCCTAAATACCTTTGGAGTTAAGTATACAATCGACTTCGCCAAAAAATGTACCAAACTCAAAGTGCTTGTGCATGTCTCAACAGCTTATGTATGTGGTGAGGGAGAAGGACTAATATTAGAGAAACCATATGATGTGATTGATTCACTAAATGGAGTGCTTGGACTAGACATTGCTGTAGAAGAGAAAGTGGTGCTTGAAAAGTTAGGTGAGTTACAAAAGCAGGGTGCCACAGAGAATGAAATTAAAATGGTCATGAAGGACTTAGGTATTACCAGGGCAAAGAAGTATGGATGGCCAAATACATACGTATTTACAAAGGCAATGGGAGAAATGGTTGTAGAAAAACTGAGAGGAAACTTGTCCGTTGTTATTCTTCGTCCTTCCATAGTTACCAGTACATTCAAAGAACCTTTCCCTGGTTGGGTTGAAGGCATAAGAACCATTGATAGTTTAGCTGTAGCTTATGGAAAAGGAAAACTAGCATGCTTCCTTGGAGATCCCAAGGCACTTATTGATGTGATACCAGCTGACATGGTGGTGAATGCAATGCTGGTGGCCATGGTAACTCATGCAAATTATCCTAGTAACACTATATATCATCTTACCTCCTCAGTTAGAAAACCAATAAGATTGGGTGCATTACAAGACTATGGCTACTTATATTTCACGGCAAAACCATGGATCAACAAGGATGGAAAGCCTGTCAAGGTTGGCAAATGTGTTGTCTTAGAGAACATGGATAGCTTCCACAGATATATGTTCATTCGCTACATTCTTCTCTTAAAGGGACTTGACCTGGTCAACACTGCATTTTGCCAGTACTTCAAGGGAACTTATCTTGATCTCAACAGGAAGATACAAATTGTGATGCGGTTGGTGGATCTTTACAAGCCTTATCTGTTCTTCACGGGCGCATTTGATGATATGAACACTGAAAAGTTGCGGATTTCAGCAAGACAAGGTGGGGTGGAGACAGATTTGTTTTACTTTGACCCCAAAGTGATCAATTGGGATGATTACTTTTTGAACACCCATCTCCCTGGTGCAGTGAAGTACATTTTCAAGTGA 1473 0.3924 MELGSILHFLENKSILITGATGFLAKILLEKILRVQPNVKKLYLLLRAADTESATHRLHNEIIGKDLFKLLKEKMGANFNSFLLEKLTLVPGDISREGLGLEDYILRGEIYNQTDVIINLAATTNFDERYDISLSLNTFGVKYTIDFAKKCTKLKVLVHVSTAYVCGEGEGLILEKPYDVIDSLNGVLGLDIAVEEKVVLEKLGELQKQGATENEIKMVMKDLGITRAKKYGWPNTYVFTKAMGEMVVEKLRGNLSVVILRPSIVTSTFKEPFPGWVEGIRTIDSLAVAYGKGKLACFLGDPKALIDVIPADMVVNAMLVAMVTHANYPSNTIYHLTSSVRKPIRLGALQDYGYLYFTAKPWINKDGKPVKVGKCVVLENMDSFHRYMFIRYILLLKGLDLVNTAFCQYFKGTYLDLNRKIQIVMRLVDLYKPYLFFTGAFDDMNTEKLRISARQGGVETDLFYFDPKVINWDDYFLNTHLPGAVKYIFK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0321 490 Pfam Male sterility protein 17 318 IPR013120 -
Lal9g0321 490 CDD FAR-N_SDR_e 13 361 - -
Lal9g0321 490 Pfam Male sterility protein 392 490 IPR033640 -
Lal9g0321 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Lal9g0321 490 CDD FAR_C 390 489 IPR033640 -
Lal9g0321 490 Gene3D - 8 365 - -
Lal9g0321 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Lal9g0321 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0321 Lal-Chr9 2112307 2118264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0321 112 489 Acyl Lipid Metabolism Gene Families AT4G33790 60.582 2.14e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0321 K13356 - gmx:100798338 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0321 9 2112307 2118264 Lal9g0321 9 2112307 2118264 ECH
Lal1g0423 1 2633119 2640051 Lal9g0321 9 2112307 2118264 LSH
Lal25g0233 25 1603469 1608233 Lal9g0321 9 2112307 2118264 PCT
Lal9g0321 9 2112307 2118264 Lal25g0233 25 1603469 1608233 PCT