Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0423 ATGGAGTTAGGAAGCATACTTCACTTCCTTCAGGATAAATCCATTTTAATCACTGGTGCCACTGGCTTTCTTGCCAAAATTTTGTTGGAGAAGATATTGAGGGTTCAACCAAATGTTAAGAAGCTGTATCTTCTTTTAAGAGCTGCAGATGCTAAATCTGCTACTCATCGCTTACACACTGAGATCATAGGGAAGGACTTGTTTAGATTGCTAAAGGAAAAAATGGGTGCAAATTTCAATTCATTCATTTCCGAAAAGTTGACACTCGTGCCTGGAGACATTTCTCGTGAAGGCCTGGGTTTGGAAGATTCCATTCTAAGGGAAGAGATTTACAATGAAACAGATGTTATTATTAATTTAGCTGCAACCACTAACTTTGACGAAAGGTATGATATATCGTTGGGCTTAAATACCTTTGGAGTTAAGTATACAATCGATTTCGCCAAAAAATGTACTAAACTCAAGGTGCTTATACATGTCTCAACAGCATATGTATGTGGTGAGGGAGAAGGACTGATATTAGAGAAATCATATCATTTGGGTGATTCACTAAATGGTGTGACTGGACTAAACATTGATTTAGAAGAAAAAGCGGTGCATGACAAGTTACGTGAGCTACACCAGCAGAATGCCACGGAAAATGAAATTAAAAAAGCCATGAAGGACTTGGGTATTACCAGGGCAAATAAGTATGGATGGCCAAACACATACGTATTTACAAAAGCAATGGGAGAAATGGTTGTGGAAGAACTGAGAGGAAACTTGTCAGTTGTTATTATTCGTCCTTCCATTGTTACTAGTACTTTCAAAGAACCTTTCCCTGGTTGGGCTGAAGGCATAAGAACCATTGACAGTTTAGCTGTAGCTTATGGAAAGGGAAAACTAACATGCTTCCTTGGAGATCCTAAGGCACTTGTTGATGCGATACCAGCTGATATGGTTGTGAATGCAATGCTAGTAGCCATGGTGAATCATGCAAATCATCCTAGTGACACTATATATCATGTTAGTTCCTCAGTTAGAAAACCACTTAGATATGGCGACATACAAGACTATGGCTACACATATTTCACAGCAAAACCATGGATCAACAAAGATGGAAAGCCTGTTAAGGTTGGCAAATGTATTGTCTTGAAAAACATGGATAGCTTTCGCAGATACATGTTCATTCGCTATGTCCTTCTTTTAAAGGGACTAGAGTTAGCAAACACTGCATTTTGTCAATACTTCAAGGGAGCATATCTTGATCTCAACAGAAAGATCCAGATTGTGATGCGGTTGGTTGAGCTTTACAAGCCTTACTTGTTTTTCAAGGGCGCATTTGATGATATGAATACAGAGAAGTTGAGAATGGCAGCAAGAGAAGGTGGGGTTGAGACAGATTTGTTTTACTTTGACCCTAAAGTGATCAATTGGGATGATTACTTTTTGAACACCCATCTCCCTGGTGCAGCAAAGTACATTTACAAGTGA 1473 0.3897 MELGSILHFLQDKSILITGATGFLAKILLEKILRVQPNVKKLYLLLRAADAKSATHRLHTEIIGKDLFRLLKEKMGANFNSFISEKLTLVPGDISREGLGLEDSILREEIYNETDVIINLAATTNFDERYDISLGLNTFGVKYTIDFAKKCTKLKVLIHVSTAYVCGEGEGLILEKSYHLGDSLNGVTGLNIDLEEKAVHDKLRELHQQNATENEIKKAMKDLGITRANKYGWPNTYVFTKAMGEMVVEELRGNLSVVIIRPSIVTSTFKEPFPGWAEGIRTIDSLAVAYGKGKLTCFLGDPKALVDAIPADMVVNAMLVAMVNHANHPSDTIYHVSSSVRKPLRYGDIQDYGYTYFTAKPWINKDGKPVKVGKCIVLKNMDSFRRYMFIRYVLLLKGLELANTAFCQYFKGAYLDLNRKIQIVMRLVELYKPYLFFKGAFDDMNTEKLRMAAREGGVETDLFYFDPKVINWDDYFLNTHLPGAAKYIYK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0423 490 CDD FAR-N_SDR_e 13 361 - -
Lal1g0423 490 Pfam Male sterility protein 392 490 IPR033640 -
Lal1g0423 490 Pfam Male sterility protein 17 318 IPR013120 -
Lal1g0423 490 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Lal1g0423 490 CDD FAR_C 390 488 IPR033640 -
Lal1g0423 490 Gene3D - 8 369 - -
Lal1g0423 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
Lal1g0423 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 338 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0423 Lal-Chr1 2633119 2640051 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0423 112 489 Acyl Lipid Metabolism Gene Families AT4G33790 58.730 9.74e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0423 K13356 - gmx:100798338 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0423 1 2633119 2640051 Lal1g0423 1 2633119 2640051 ECH
Lal1g0423 1 2633119 2640051 Lal9g0321 9 2112307 2118264 LSH
Lal25g0233 25 1603469 1608233 Lal1g0423 1 2633119 2640051 PCT
Lal1g0423 1 2633119 2640051 Lal25g0233 25 1603469 1608233 PCT