Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0232 ATGGGAGACAAGGTGAACTATGAAAGTTTGAGCATGAGCTCTAAACCGAGAAGTGCAGTCATCACTGGGGGAAAAACGTACAAGAAACTACTGGTTGCATCGCGCACTAAAGGTTTTGCAAAGAAAAATTATGAGCACCTTGTTTCGTTGACCCATGGTGACTTCGGAAGCAGTTCTGTGGGTCGTGCCACTTTTTTTTTACTTAAACTTGCTGCATTAGAGATTGTAAGGAGGTTCTCCAAGACTAGATTTCCATGTGTATGGCAAGGTCTACAAGGTTTACAAATCCTTGTCTATCCACCATTTAGATGGATTCAGAGGTGGGCACCCTTGAAGGGTTTGGTCAAAAGTATGCAGGTACTATCACGACCATTACTAGTCCTTTCGATTGTAACAGCTTTTACTGATCAACATTCACAAGGCAGTGATGGAACGTCAGATGGCATTCCCAATTCCCATGACTCGGAAGTATCTGCGGAACTGTCTCTTGTGCAGGCTAATTCCAATACAGGCAACTCTGAGAGAACTCCCAAAGTTTCAGAATATGAGAACTGGTTGACTCAACTCAATCAAGAGCTGGAAAATCAAGGGATCATTTTGTCGGAAAGAATCAATGATGATGAGCTCCACAGATTTTACACAGCATCTAATAATGACTTTTCATGCTTCCTCGACTCAATCAAGAAGACAATACGCTGGCGGGACAGTTACAGAATTTTTTCAGGAGAAGAGCTGGAATTGTGGTCAAATATGGTGTTCTGGCATGGGTGTGATGTGATGCACAGACCTTGCCTCATTGTTAGGCTTGGGCTAGCTTGTAGCTCATTGGCATCTAAAGATAGACCTCGATTTGCTCAGGCAATCATATCACAGGTAGAATATGGAGTCTTAAACCTTGTTGATGCTGACAACCCTCAAATTACAGTATTGGTGGATTGTGAAAGGTTATCCCCATTGAAAATTCCCACGAAAGTGATGAGGTCTTGTTCTTCCCTTCTGCAAGATCACTTTCCTAATCGTCTTGGTTGTTTGTTTGTCATACGACTTCCAGCAGTTGTTCGTGTTATTGCCCAGACTTTTATTAAGGTTCTAAAGCCAACTACTCGGAAAAAGTTGAAAATACATGGAGAGATGTATCAGAAGGTTCTTCATGACAACCTGCAGACACTACCACAATATCTTGGAGGCAGCTGCACTTGCATGAAATGTTCAAAAATTGGGACTAGCAGGATTAATAATGGTGCAGATATCAGTGACAATGAGGCTTCTCCATCACTGCATCCATCTGATGAATTAGATCACCACCAAAATAGCAACTATGACCAGTTGTTCAGATCCGCTATCGTAAGTATTATTGTATTTTGGGTTTTCATAGCTGTTGGTGCTGGAATATACCATCCTGGTAATCTTCGTCTGCCCTCATAA 1425 0.4196 MGDKVNYESLSMSSKPRSAVITGGKTYKKLLVASRTKGFAKKNYEHLVSLTHGDFGSSSVGRATFFLLKLAALEIVRRFSKTRFPCVWQGLQGLQILVYPPFRWIQRWAPLKGLVKSMQVLSRPLLVLSIVTAFTDQHSQGSDGTSDGIPNSHDSEVSAELSLVQANSNTGNSERTPKVSEYENWLTQLNQELENQGIILSERINDDELHRFYTASNNDFSCFLDSIKKTIRWRDSYRIFSGEELELWSNMVFWHGCDVMHRPCLIVRLGLACSSLASKDRPRFAQAIISQVEYGVLNLVDADNPQITVLVDCERLSPLKIPTKVMRSCSSLLQDHFPNRLGCLFVIRLPAVVRVIAQTFIKVLKPTTRKKLKIHGEMYQKVLHDNLQTLPQYLGGSCTCMKCSKIGTSRINNGADISDNEASPSLHPSDELDHHQNSNYDQLFRSAIVSIIVFWVFIAVGAGIYHPGNLRLPS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0232 474 Gene3D - 174 441 IPR036865 -
Lal9g0232 474 SMART sec14_4 246 399 IPR001251 -
Lal9g0232 474 CDD SEC14 243 396 IPR001251 -
Lal9g0232 474 SUPERFAMILY CRAL/TRIO domain 247 401 IPR036865 -
Lal9g0232 474 Pfam CRAL/TRIO domain 250 396 IPR001251 -
Lal9g0232 474 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 12 469 - -
Lal9g0232 474 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 254 402 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0232 Lal-Chr9 1429584 1442792 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0232 - - lang:109355367 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0232 9 1429584 1442792 Lal9g0232 9 1429584 1442792 ECH
Lal2g0239 2 1394388 1399230 Lal9g0232 9 1429584 1442792 LSH
Lal25g0149 25 941702 946205 Lal9g0232 9 1429584 1442792 PCT
Lal9g0232 9 1429584 1442792 Lal25g0149 25 941702 946205 PCT