Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0149 ATGGGAAACACTGTGGATTGTTCTAAGTTTAGCAATAGCTCTAAACCAGGCAGAGTCATGACTGGGAAAAAAACGTACAAGAAACCTCTACTTCCATCTCAATCTAAATGTTTCACACTGATAAACTATGGTGGCTTTAGAAGTAGTTCTGTGGGTTCTATCACTACTTTTTTACTTAAAGTTGCTGCCTTAGAGATGATTAGGAGGTTCTCCAAAAGCAGATGTCCATATGTTTGGCAAGGCCTTCAGGCTTTACAGATGCTTTGTTATCCACCTCTCGAATGGATTCAGTGGTGGGCACCCTTCAAGCGTTTGGTTAAAAGCATGCAGATCCTATCAAGACCGTTACTAGTCATTTCAATTGCCACGTGTTTTCCTGATAAATCAGAATGTAGCAATGAAACGTTAGATTGTAGTACTGATTCACGTGATTCTGTAGCATACTCGGAAGAATCTAAAGTGAAGGATGATATGAATACAAGTCAGCATGTGACAGATCCTAAAATTTTAGAATCTGAAAACTGGTTGATGAAACTCCACCAAGAGCTTGAAAATCAAGGGATTAGTTTACCAGGAAGAATCAACGATGATGAGCTACACAGATTTTTTGCAGCTTCTAATAATGATTTTTCATGCTTCCTTGCCTCAATCAAGAAGACCATAAACTGGCGAAAGACTTACAGGATTCTTTCAGAAGAAGAGCTGATAATGTGGTCCGAAATGATCTTCTGGCATGGGTCTGATATGATGCACAGACCCTGTCTTGTTGTAAGGCTTGGGCTAGCTTGCAATACATTGACATCCCAAGATAGGCCTGGATTTGCTCAGGCAGTCATATCACAGGTGGAATATGGAGTGTTGCACTTGGTTGATGCAGACAACCCTCAAATTACTGTGTTGGTGGATTGTGAAGGATTGTCTCCATCGAGAATTCCCATGCAAATGATGAAATATTGTTCTTCCTGTTTGCAGGATCACTTTCCTAATTGCCTTGGTTGTTTGTTTGTCATACGACTTCCAGAAGTTGTTGATGCTATTGCCCAGACTTTTATTGAGGTTTTGGAGCCAGCTACAAGGAACAAGTTAAAAATAGAAGGCCATATGTATCAGAAGGTTCTTTCTGACTATCTGTTAACACTGCCATCATATCTCAGTGGCTCCTGCACTTGCATGAAGTGCTCCGAATTTGGAAATCGGGAAATGCTGCAACCTCATACAATTGGAACCAGCAGGAGAGATGAGGAAAGTGATATTAGTGATGATGAGGATTCTTCATCATTGCATCCTTCCAATGAAATAGGGTTCAGCTTAGATGGTAGTTATGAACAGGTGATAAGAAATGTTATCATAGGTTTTCTCATATTTTGGGCTTTCATTTCTCTTTGTGCTTTACTACATGATTCTGGTGGTCTTTATCCACCCTCATAA 1428 0.4013 MGNTVDCSKFSNSSKPGRVMTGKKTYKKPLLPSQSKCFTLINYGGFRSSSVGSITTFLLKVAALEMIRRFSKSRCPYVWQGLQALQMLCYPPLEWIQWWAPFKRLVKSMQILSRPLLVISIATCFPDKSECSNETLDCSTDSRDSVAYSEESKVKDDMNTSQHVTDPKILESENWLMKLHQELENQGISLPGRINDDELHRFFAASNNDFSCFLASIKKTINWRKTYRILSEEELIMWSEMIFWHGSDMMHRPCLVVRLGLACNTLTSQDRPGFAQAVISQVEYGVLHLVDADNPQITVLVDCEGLSPSRIPMQMMKYCSSCLQDHFPNCLGCLFVIRLPEVVDAIAQTFIEVLEPATRNKLKIEGHMYQKVLSDYLLTLPSYLSGSCTCMKCSEFGNREMLQPHTIGTSRRDEESDISDDEDSSSLHPSNEIGFSLDGSYEQVIRNVIIGFLIFWAFISLCALLHDSGGLYPPS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0149 475 CDD SEC14 232 388 IPR001251 -
Lal25g0149 475 Pfam CRAL/TRIO domain 241 375 IPR001251 -
Lal25g0149 475 Gene3D - 170 426 IPR036865 -
Lal25g0149 475 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 232 392 IPR001251 -
Lal25g0149 475 MobiDBLite consensus disorder prediction 404 431 - -
Lal25g0149 475 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 27 468 - -
Lal25g0149 475 SUPERFAMILY CRAL/TRIO domain 236 391 IPR036865 -
Lal25g0149 475 SMART sec14_4 236 389 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0149 Lal-Chr25 941702 946205 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0149 - - gmx:100786215 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0149 25 941702 946205 Lal25g0149 25 941702 946205 ECH
Lal25g0149 25 941702 946205 Lal2g0239 2 1394388 1399230 PCT
Lal25g0149 25 941702 946205 Lal9g0232 9 1429584 1442792 PCT
Lal2g0239 2 1394388 1399230 Lal25g0149 25 941702 946205 PCT
Lal9g0232 9 1429584 1442792 Lal25g0149 25 941702 946205 PCT