Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0239 ATGGGAGACACGGTGGACTATGGTAACCTGAGCATGAGCTCTAAACCAAGCAGTGCTGCCATCACCGGCAAAAGAACCTACAAGAAACTACTGGTTGCATCACGCCCTAAAGGTTTTGCTAAGAGAAATTATGAACAACTTGTTTCGTTGACCCATGGTGACTTCGGCAGCAGTGTTGTTGGTCGTGCCACAGTTTTTATACTTAAGGTTGCTGCCTTAGAGATCGTAAGGAGGTGCTCCAAGACTAAATTTCCATTTGTATGGCGAGGTTTACAAGGTCTTCAGATCCTTGTCTATCCACCTTTGAAATGGATTCAGAGGTGGGCTCCCTTCAAGGGTTTGGTCAAAAGTATGCAGGTACTATCGCGGCCATTACTAGTCCTTTCGATTGCAACAGCTTTTACTGATCAACATTCGCAATGTAGTGATGGAACGTCAGAAGGTATTCCTGATTCCCATGATTCAGAACTATCTGTGGAACTATCTCCTGTGCAAGCTAATTCTAATACAGGCAACTCTGAGAGAGCTCCTGAAGTTTCAGAGTATGAGAACTGCTTGACTCAACTCAATCAAGAGCTGAAAAATCAAGGGATCATTTTGCCAGAAAGAATCAATGATGAAGAGCTCCACAGATTTTACACAGCTTCTAATAATGACTTTTCATGCTTTCTCACCTCAATCAAGAAGACAATACACTGGCGGGAGAGTTACAGAATTTTTTCAGTAGAGGAGCTGGAATTGTGGTCAAATATGGTGTTCTGGCATGGGTCTGATGTGATGCACAGACCTTGCCTCGTTGTAAGGCTTGGGCTAGCTTGTTGCTCATTGTCATCTAAAGATAGACCTCTTTTTGCTCAGGCAATCATGTCACAGGTAGAATATGGAGTCTTAAACTTGGTTGATGCTGACAACCCTCAAATTACAGTGTTAGTGGATTGTGAAAGGTTATCTCCATTGAAAATTCCTATGAAAATGATGAGGTCTTGTTCTTCCCTTCTGCAAGATCACTTTCCTAATTGTCTTGGTTGTTTGTTTGTCATACGACTTCCGGCATTTGTTCGTGTAATTGCTCAGACTTTTATTCAGGTTTTAAAGCCGGCGACTAGGAAAAAGTTGAAAATACATGGAGAGATGTATCATAAGGTTCTTCATGACAATCTACCGACACTGCCATCATATCTTGGAGGCAGCTGCACTTGCATGAAATGTTCTAAAATTGGCAAGTGGGATATGCTGCAATGTCATGCAAGTGGGACAAGCAGGATTAATAGTGGGGCAGATATCAGTGACAATGAGGCTTCTACATCACTGCATCCATCTGATGAATTAGATCGCCACCAAAACAGCAACTATGACCAGTTCCTGAGATCCGCTATAGTAAGTATTATCGTATTTTGGGTTTTCATAGCTGTTGGTGCTGGAATATATAACCCTGGTAGTCTAGGTTTGCCCTCTTAA 1458 0.4225 MGDTVDYGNLSMSSKPSSAAITGKRTYKKLLVASRPKGFAKRNYEQLVSLTHGDFGSSVVGRATVFILKVAALEIVRRCSKTKFPFVWRGLQGLQILVYPPLKWIQRWAPFKGLVKSMQVLSRPLLVLSIATAFTDQHSQCSDGTSEGIPDSHDSELSVELSPVQANSNTGNSERAPEVSEYENCLTQLNQELKNQGIILPERINDEELHRFYTASNNDFSCFLTSIKKTIHWRESYRIFSVEELELWSNMVFWHGSDVMHRPCLVVRLGLACCSLSSKDRPLFAQAIMSQVEYGVLNLVDADNPQITVLVDCERLSPLKIPMKMMRSCSSLLQDHFPNCLGCLFVIRLPAFVRVIAQTFIQVLKPATRKKLKIHGEMYHKVLHDNLPTLPSYLGGSCTCMKCSKIGKWDMLQCHASGTSRINSGADISDNEASTSLHPSDELDRHQNSNYDQFLRSAIVSIIVFWVFIAVGAGIYNPGSLGLPS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0239 485 SUPERFAMILY CRAL/TRIO domain 246 401 IPR036865 -
Lal2g0239 485 CDD SEC14 243 396 IPR001251 -
Lal2g0239 485 SMART sec14_4 246 399 IPR001251 -
Lal2g0239 485 Gene3D - 179 450 IPR036865 -
Lal2g0239 485 MobiDBLite consensus disorder prediction 425 444 - -
Lal2g0239 485 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 12 480 - -
Lal2g0239 485 Pfam CRAL/TRIO domain 250 396 IPR001251 -
Lal2g0239 485 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 254 402 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0239 Lal-Chr2 1394388 1399230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0239 - - lang:109355367 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0239 2 1394388 1399230 Lal2g0239 2 1394388 1399230 ECH
Lal2g0239 2 1394388 1399230 Lal9g0232 9 1429584 1442792 LSH
Lal25g0149 25 941702 946205 Lal2g0239 2 1394388 1399230 PCT
Lal2g0239 2 1394388 1399230 Lal25g0149 25 941702 946205 PCT