Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0126 ATGGCCATCCAAGCTCAGTTTTATCACAGCAATGGTGGGTCTAATCCATTTTTTGACAATGGATTTTATACTGCTGGCTTTACAGATTCATGTTTCAATCCCCAACAGAGACATCAGCAGCAGCTGCAACAATTACAACAACGTTTGCAACAGTCACACAATGAGAGCCACAACAACCTTGTTGGTCCAAATCTTCTTGTTCATAATTCAAAAGCTTTGAATCCTCCTCCATCTTTTCCCCAGTTGGAAGAGATTGATCACTACATCAGATTACAGAATGAGCATCTGAGATTGATGCTTCAAGAGCAGGGAAATCAACAAGTATTAGCATTACTAAATAGAGTGGAATCTCATTCGCTGAAAATCCTGAAGCAAAAAGATGAAGAGATTGCAAAGGCTACAAAGAAAAGGTTAGAGTTGGAAGATTTTATAAAAAGACTAGAGGCAGAGAATCAAGGGTGGCAAAAGATAGCAATGGAAAACGAAGCAATGGCATTATCTTTGTACAGAACATTGGAGGAGATGAAAGAAAAAACAGCCAATAATAACAATGTGGCAGATGATGCAGAATCATGGTGTGACGAAAGGAGAAGAGACAAAGAAGAAGCAATAGGGGAAAATAGAATAGGAGTTGAAATGGAACAGATAACGAGGGAGATAATGTTATGTAAAAGCTGTAATTCTAGGAGGTCGTGCTTTTTGTTCCTTCCATGTAGGCACCTTTGTTCATGCAAAGCTTGTGATGCTTTTCTTAAGACTTGCCCTGTCTGCACAATGCCTAAGAAAGCGAGCATAGAAACTTTAATTTAA 810 0.3877 MAIQAQFYHSNGGSNPFFDNGFYTAGFTDSCFNPQQRHQQQLQQLQQRLQQSHNESHNNLVGPNLLVHNSKALNPPPSFPQLEEIDHYIRLQNEHLRLMLQEQGNQQVLALLNRVESHSLKILKQKDEEIAKATKKRLELEDFIKRLEAENQGWQKIAMENEAMALSLYRTLEEMKEKTANNNNVADDAESWCDERRRDKEEAIGENRIGVEMEQITREIMLCKSCNSRRSCFLFLPCRHLCSCKACDAFLKTCPVCTMPKKASIETLI 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0126 269 Coils Coil 35 55 - -
Lal9g0126 269 Coils Coil 130 150 - -
Lal9g0126 269 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 269 IPR017066 -
Lal9g0126 269 Pfam Zinc finger, C3HC4 type (RING finger) 221 261 - -
Lal9g0126 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 196 268 IPR013083 -
Lal9g0126 269 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 269 - -
Lal9g0126 269 PIRSF SBP1_RNase_bind 8 74 IPR017066 -
Lal9g0126 269 PIRSF SBP1_RNase_bind 79 269 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0126 Lal-Chr9 833401 834804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0126 222 257 Miscellaneous Gene Families AT2G21380 41.667 6.10e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0126 K19042 - gmx:100789863 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0126 9 833401 834804 Lal9g0126 9 833401 834804 ECH
Lal1g0170 1 1069680 1073056 Lal9g0126 9 833401 834804 LSH
Lal2g0102 2 644339 645796 Lal9g0126 9 833401 834804 LSH