Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0102 ATGGCCATTCAAGCTCAGTTTTACCACACCAATGGTGGGTCTAGTTCATTTTGTGACAATGGTTTTCATGCCTCTGGGTTTACAGACTCATGTTTCAATCCCCAGCAGATACATCTACAGCAGCTACAACAATTACAACAACGTTCACAACAGCCATATAATGAGAGCCAATACAACCTTGTTGATCCAAATCTTCTTGTTTATAATTCAAAAGCTTTGAATCCTCCTAAATCTTTTTTTCACTTGGAAGACATTGATCAGTACATCAGATTACAGAATGAGAAATTAAGGTTTGTGCTACAAGAGGTGGTAAAGCAACAAGTATCAGAATTACAGAATAGAGTGGAATCTCATTCGTTTAAACTCCTGAAGCAAAAAGATGAAGAGATTGCAAAGGCTATAAAGAAAAGGGTAGAGTTGGAAGATTTTATAAAAAGAGTAGAGACAGAGAATGAAGGTTGGCAAAAGATGGCTCAGGAAAATGAAGCAACAGCATTATCCCTGTACAAAACATTGGAGGAGATGAAAGAAAAAGCATCCTATAATAACAATGGGATGGTGGTGGCAGATGATGCAGAATCATGGTGTGACGAAAGGAGAAGAGACAAAGAAGAAGGAAAAGTAGGAGGAAATAGAAAAGGAATTGAAATGGAACAGATAACAAGGGAGATGATGATTTGTAAAAGTTGTAATTGTGAGAGGTCATGCTTTTTGTTCCTTCCATGCAGGCACCTTTGTTCATGCAGAGCTTGTGATGCTTTTCTGAAAGCTTGCCCTGTGTGCACAATGCCAAAGAAAGCTAGTATTGAAACTTTAATTCAATAA 825 0.377 MAIQAQFYHTNGGSSSFCDNGFHASGFTDSCFNPQQIHLQQLQQLQQRSQQPYNESQYNLVDPNLLVYNSKALNPPKSFFHLEDIDQYIRLQNEKLRFVLQEVVKQQVSELQNRVESHSFKLLKQKDEEIAKAIKKRVELEDFIKRVETENEGWQKMAQENEATALSLYKTLEEMKEKASYNNNGMVVADDAESWCDERRRDKEEGKVGGNRKGIEMEQITREMMICKSCNCERSCFLFLPCRHLCSCRACDAFLKACPVCTMPKKASIETLIQ 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0102 274 Coils Coil 130 164 - -
Lal2g0102 274 PIRSF SBP1_RNase_bind 77 274 IPR017066 -
Lal2g0102 274 PIRSF SBP1_RNase_bind 23 74 IPR017066 -
Lal2g0102 274 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 273 - -
Lal2g0102 274 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 273 IPR017066 -
Lal2g0102 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 203 273 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0102 Lal-Chr2 644339 645796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0102 K19042 - gmx:100789863 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0102 2 644339 645796 Lal2g0102 2 644339 645796 ECH
Lal1g0170 1 1069680 1073056 Lal2g0102 2 644339 645796 LSH
Lal2g0102 2 644339 645796 Lal9g0126 9 833401 834804 LSH