Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0110 TTTGTTTTCATGTCCATGCTACTCTATCTTGTTCAAAGTTTAACCATGCATGGCAAAAGAAGTGATTTTGTCTTCTCACGTGCCACCACAGGTTATTATGAGGCCAAAGCTTTGTCTTATGATTATTCTGCCAGCGTTGAATGTTTGGCACAACCTCATAAGCCTCAGTATAATGGAGGAATCATAACAAACCCAGAAGTGAATAATGGACTACAAGGTTGGACTGCATTTTCTGGTGCACAAATAGAGCAAAGAGAATCATCAGGCAACAAATATGTGGTAGCCCATCACAGGAAACAAGCTTATGACAGTGTCTCCCAAAAGATTAACCTCCAAATGGGAACACATTATACTTTATCTGCTTGGATACAAGTGACTGGAAATAATGTTCCAGTAATAGCTACAGTCAAAACAAGTAAAGGGTACAACCTTGCTGGTGCCATCTTTGCTGAGTCAAATTGCTGGTCCATGCTTAAGGGTGGTCTCACAGCAGATACATCAGGACCAGCTGAACTCTATTTTGAGAGCAATAATACATCCGTGGACATTTGGATCGACAGTGTGTCCTTACAGCCATTCACAGAAAAGGAATGGAACTCTCATCAAGTTCAGAGCATTGAGAAGGCACGGAAGAGGAAGGTATTAGTGAAAGCAGTTGATAAAGAAGGGAAACCTATTCGAAGTGCTAGTATATCTATTGTACAGAAGAAGTCAGGGTTTCCAATTGGAAGTGCAATAACTAACCACATCCTGAAAAGTAATGCATACCAAAAATGGTTCACTTCTAGGTTCAGTGTTGCCACATTTGCAAATGAAATGAAGTGGTATAGCACTGAGTCTGTGCAAGGCAAAGAGAACTATGGTGATGCTGATTCCATGCTACAGTTTGCTAAGCAAAACAATATTAGTGTTAGAGGACACAATGTATTTTGGGATGATCCTCATTACCAACCTAGTTGGGTTCCTTCACTCTCCCCTAGCCAGCTTAAATCAGCAGTTCAAAAGAGGATTCAATCTGTTGTCACAAGATACAAGGACCAGCTTATTCACTGGGATGTTAATAATGAAAACATGCACTTTTCATTCTTTGAGAGTAAACTTGGAAAAGACTTTTCAGGGTGGCTGTTCAATGAGGTTAACAAGATTGATCCAAAAGTAACTTTATTCTTGAATGATTATAACACAATTGAAGAAATTAGAGACAGTTCAGTAACAGCTTCAAAGTATGTCCAGAAAGTCAAAGAGATCAAAAGCTATCAAGGGAATAACGGATTGACAATTGGGATTGGTCTTGAGGCTCATTTCACAAATGTTCCTAACCTTCCTTACATGAGATCTACCATTGATACCCTTGCTGCCACAGGTTCCCCTGTTTGGATTACTGAAATAGATGTTGCAAACCAACCCAAACAGGCAGAGTACTTTGAACAGGTTCTGAGAGAAGCACACTCTCACCCAAAGGTTGAGGGTATTGTAATGTGGACAGGGTGGTCACCAAATGGTGAATGCTATAGGATTTGTTTGGTTGATACAAATTTCAAGAACTTGCCTGGTGGTGATGTTGTGGATAAATTGCTTAATGAGTGGGGTTCTACACAAGTATCAGGGATCACTAACCAAAATGGGATACTTGAGGCCACACTTTTTCATGGTCACTACCATGTCACAATTACTGACCCTACCAAGAAGAATTACAACTTCACTCACCCTATCAAAGTGCTTCCCATAAATCAATCCAAGAAAACAACATCACAACTCATACAACTTTCTATATAA 1776 0.3981 FVFMSMLLYLVQSLTMHGKRSDFVFSRATTGYYEAKALSYDYSASVECLAQPHKPQYNGGIITNPEVNNGLQGWTAFSGAQIEQRESSGNKYVVAHHRKQAYDSVSQKINLQMGTHYTLSAWIQVTGNNVPVIATVKTSKGYNLAGAIFAESNCWSMLKGGLTADTSGPAELYFESNNTSVDIWIDSVSLQPFTEKEWNSHQVQSIEKARKRKVLVKAVDKEGKPIRSASISIVQKKSGFPIGSAITNHILKSNAYQKWFTSRFSVATFANEMKWYSTESVQGKENYGDADSMLQFAKQNNISVRGHNVFWDDPHYQPSWVPSLSPSQLKSAVQKRIQSVVTRYKDQLIHWDVNNENMHFSFFESKLGKDFSGWLFNEVNKIDPKVTLFLNDYNTIEEIRDSSVTASKYVQKVKEIKSYQGNNGLTIGIGLEAHFTNVPNLPYMRSTIDTLAATGSPVWITEIDVANQPKQAEYFEQVLREAHSHPKVEGIVMWTGWSPNGECYRICLVDTNFKNLPGGDVVDKLLNEWGSTQVSGITNQNGILEATLFHGHYHVTITDPTKKNYNFTHPIKVLPINQSKKTTSQLIQLSI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0110 591 Gene3D - 49 194 - -
Lal9g0110 591 SUPERFAMILY (Trans)glycosidases 225 533 IPR017853 -
Lal9g0110 591 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 33 581 - -
Lal9g0110 591 SUPERFAMILY Galactose-binding domain-like 58 191 IPR008979 -
Lal9g0110 591 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 228 525 IPR001000 GO:0004553|GO:0005975
Lal9g0110 591 Pfam Glycosyl hydrolase family 10 236 495 IPR001000 GO:0004553|GO:0005975
Lal9g0110 591 SMART glyco_10 273 524 IPR001000 GO:0004553|GO:0005975
Lal9g0110 591 PANTHER GLYCOSYL HYDROLASE 33 581 IPR044846 GO:0004553|GO:0005975
Lal9g0110 591 Pfam Carbohydrate binding domain 61 177 IPR003305 GO:0016798
Lal9g0110 591 Gene3D Glycosidases 228 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0110 Lal-Chr9 698888 701424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal9g0110 34 568 Glycoside Hydrolase AT4G33840 56.192 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0110 - - gmx:100775272 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0139 1 911240 917630 Lal9g0110 9 698888 701424 LSH
Lal2g0086 2 522815 525388 Lal9g0110 9 698888 701424 LSH