Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0086 ATGTATAACTCAAAAAATGTGAGCATTGGTTTTCTGCTATGTGTCAACCTTTTCGCAGGTTTTGAAGCTGAAGCTTTGCCTTATGATTACAGTGCTACCATTGAATGTTTGGCAGAACCTGAGAAGCCTCAATATTATGGAGGAATCATTCAAAACCCAGAACTGAACAATGGACTAGAAGGGTGGAGTGCATTTGGGGACGCAATAATAGATCATAGAGAATCATTAGGTAACAAATATGTTGTAGCATATACCAGAAACCAACCTCATGATACTGTCTCACAGAAGATTTACCTACAAAAGGACAACCATTATGTTTTATCTGCTTGGATACGAGTGAGTGAGGGAAATGCTCCAGTAACAGCAGTTGTGAAAACAAGTGAAGGATTCAGACATGCAGGTGTTACTGTTGCTGAATCAAATTGCTGGTCTATGCTTAAGGGTGGACTTACAGCAGATAAATCAGGTCCAGCTGAGCTTTATTTTCAGAGCAAAAATACTTCAGTAGAAATATGGATAGACAACATTTCCTTACAACCATTCACTGAAAAGCAATGGAGTTCTCATCAATATCAGAGCATTGAGAAGGCACGCAAGAGGAAGGTATTAGTGAAAGCAGTTGATGAAGAAGGAAATCCTTTACCAAATGCAACTATATCTATCACACAAAAAAATTCAGCTTTTCCAATTGGAAGTGCCATAAACAAGTACATCGTGAACAATAATGCATACCAAAATTGGTTCTCCTCCAGGTTCACAGTTGCTACATTTGAAAATGAATTGAAGTGGGCTAGCACCGAATATTCACAGGGCAAAGAGGACTACTCTGTTCCTGATGCTATGCTAAAATTCGCGAAGGACCATAACATTAGAGTTCGAGGACACAATATATTTTGGGATGATCCTAAATACATACCTAATTGGGTTTCTGCACTCTCACCAGACCAGCTTAAGTCAGCAGTTGAAAAGAGGATTCAATCTGTTGTTTCAAGATACAAGAACCAACTTATTGCATGGGATGTTGTTAATGAAAACCTTCACTTTTCATTCTTTGAAAGTAAACTTGGACAAAATTTTTCAGCCTGGGTGTTCACTGAGGTTAACAAAATTGAACCAACACAGACTTTATTCCTGAATGAATACAATACCATTGAGGAGAGTAGAGACAGTGAAGCAAACCCAACAAAGTATTTACAGAAGATACAACAGATCAAAAACTATCCTGGAGGTGCATCATTGCCAATCGAGATCGGGATCGGGCTCGAGTCTCATTTTCCTAATACTCCTCCTAACATTCCTTACATGAGATCTGCCATTGATACCCTTGCCTCCACAGGTTATCCAGTTTGGATTACAGAAATAGATGTTGCAGAGCAAACAAACCAGGCAGGGTACTTTGAGCAGGTACTGAGAGAAGCACACTCTCACCCACGGGTACAAGGCATTGTATTGTGGACAGCATGGTCACCAGACGGTAAATGCTATAGGATTTGCTTAGTTGATAATAATTTCAACAACTTGCCTGGAGGGGATGTTGTGGACAAATTGCTTAGAGAATGGGGAATCAAAAATATTTCAGGGACTACAGATCAAAATGGATTCCTTAGGACCTCTCTTTTTCATGGTGATTACATAGTAGAAATTAATCACCCTTCCAAGAAGAATCACAACCTCTCTAAGCACCTCAAAGTTATTCCAAATGATGACTCCAAGAAAACATCACAATTTTTAAAGTTTTCTATGTAG 1746 0.3906 MYNSKNVSIGFLLCVNLFAGFEAEALPYDYSATIECLAEPEKPQYYGGIIQNPELNNGLEGWSAFGDAIIDHRESLGNKYVVAYTRNQPHDTVSQKIYLQKDNHYVLSAWIRVSEGNAPVTAVVKTSEGFRHAGVTVAESNCWSMLKGGLTADKSGPAELYFQSKNTSVEIWIDNISLQPFTEKQWSSHQYQSIEKARKRKVLVKAVDEEGNPLPNATISITQKNSAFPIGSAINKYIVNNNAYQNWFSSRFTVATFENELKWASTEYSQGKEDYSVPDAMLKFAKDHNIRVRGHNIFWDDPKYIPNWVSALSPDQLKSAVEKRIQSVVSRYKNQLIAWDVVNENLHFSFFESKLGQNFSAWVFTEVNKIEPTQTLFLNEYNTIEESRDSEANPTKYLQKIQQIKNYPGGASLPIEIGIGLESHFPNTPPNIPYMRSAIDTLASTGYPVWITEIDVAEQTNQAGYFEQVLREAHSHPRVQGIVLWTAWSPDGKCYRICLVDNNFNNLPGGDVVDKLLREWGIKNISGTTDQNGFLRTSLFHGDYIVEINHPSKKNHNLSKHLKVIPNDDSKKTSQFLKFSM 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0086 581 Gene3D Glycosidases 216 524 - -
Lal2g0086 581 Pfam Glycosyl hydrolase family 10 225 486 IPR001000 GO:0004553|GO:0005975
Lal2g0086 581 Gene3D - 37 181 - -
Lal2g0086 581 SUPERFAMILY (Trans)glycosidases 212 522 IPR017853 -
Lal2g0086 581 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 223 516 IPR001000 GO:0004553|GO:0005975
Lal2g0086 581 SUPERFAMILY Galactose-binding domain-like 48 179 IPR008979 -
Lal2g0086 581 PANTHER GLYCOSYL HYDROLASE 6 558 IPR044846 GO:0004553|GO:0005975
Lal2g0086 581 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE 6 558 - -
Lal2g0086 581 SMART glyco_10 261 517 IPR001000 GO:0004553|GO:0005975
Lal2g0086 581 Pfam Carbohydrate binding domain 49 164 IPR003305 GO:0016798
Lal2g0086 581 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 446 456 IPR031158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0086 Lal-Chr2 522815 525388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0086 22 572 Glycoside Hydrolase AT4G33840 56.137 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0086 - - gmx:100775272 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0086 2 522815 525388 Lal2g0086 2 522815 525388 ECH
Lal1g0139 1 911240 917630 Lal2g0086 2 522815 525388 LSH
Lal2g0086 2 522815 525388 Lal9g0110 9 698888 701424 LSH