Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g1346 ATGGTGGGAGATGTTGCTCTTTTGCGGAACAATGGAGCTTACGCAAACTCAGCTGTAATTGGAAAGATGGGTAGCACATTCAATCCACAGATATTAGTGGAAAAACTAGGCAAGCTGAATGGTTCGCAGGCCAGCATAGAGACCAAACAAGTTGTTGAAACATGGGCAAGACAATTTCATTCTTCTCCCCGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATTTTACAGAACAGCAGGAGAAAAGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCTGATGCTCTTCGAGATGTGATTGCAAATGGGGATGAGTTTGCGAGGAATGCTGCACTTCGTCTGATTGGTATATGGGAAGACAGAAAAGTTTTTGGTTCTCGTGGTCAACTTCTTAAGGAGGAGTTTGTTGGGAGGCATGTTGAAAATAACAGCAATGATGTGAAACCTGTGAACATGAAACTGAGGCCATCAGCTGGGAATGCATTGGAGAAGATAGTTTCAGGTTATCAAATTATTTATGGAGGGCAGACAGATGAAGATGCTGTATTGAGTAAATGCAGGAATGCCATTAGCTGTCTTGATAAAGCAGACAAGGAAATAGGCCATGATAGTAATTCAGGCCAATTTCATGGATCCGCACTAGTGGATGAGCTCCAGGGGAACAATGCCATACTGACGGACTGCATTGAGCAATTAACTGCAATAGAATCTTCAAGAGCTACCCTTGTGGCTCACCTGAGAGAGGCTCTCCACAATCAGGAAATCAAGCTGGATCAAGTTCGTAGCCAGATTCAGGCTGCACGTGTTCAGTCAGAACAAGCCAGTAATACCTGCCGACAACTACTGAATGGCAGCAATCTTCGGTCATTAGCTGAACAGGGCTCCAAGGAAATTCAAACCTCCATGGCATCGTCTAGAGGCTTTATTCCTGATGACAGGGAGCAATCAGCTCCATTGATGTACACACCAGAAGCATCTTTTCCTAAAAAATCTGGACATGTCGAGGAAGATCCGCGCAAGTCTGCAGCTGCTGCAGTGGCAGCAAAACTGACTGCTTCAACTTCGTCCGCACAGATGCTGACTTATGTTCTATCCTCCCTAGCATCTGAAGGGGTTATTGGCAATCCAATGACAGAGTCTTCTGCTGATTATCACTCTGAGAAGAGGATTAAGCTTGAGAATGATCAGTTACCTTATATTCCATCTCAGAATCCTCAACAACAACAACAACCACTTCCTGAATCTATTCAACACAATGGATCTTCTACTAACCAGCATTCTACTCCCAACGAACCTCCACCCTTACCGTCATCATCACCTCCCCCATTGCCACCACTACCACCAATACCACAGTACTCAGTGCCACAATTCATGCAGACTACAGGATCTATTAGCAGTATGGCGTACAGCTATGGCGTGGCACAACAGCCATCAATGCAAGCTTATCCACCTGTCGGGGCTTCTCTGAATGCTGTCTCCCCTTTTGCTCCGGCTCAATTGAGTTCATATCAGGGTTTTCAGGGTTCAGATGGAAATTACTATAGCCAGCCTTCATCAATGCCCATGGCCCCGATGTCCCGACAATAA 1599 0.4509 MVGDVALLRNNGAYANSAVIGKMGSTFNPQILVEKLGKLNGSQASIETKQVVETWARQFHSSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIANGDEFARNAALRLIGIWEDRKVFGSRGQLLKEEFVGRHVENNSNDVKPVNMKLRPSAGNALEKIVSGYQIIYGGQTDEDAVLSKCRNAISCLDKADKEIGHDSNSGQFHGSALVDELQGNNAILTDCIEQLTAIESSRATLVAHLREALHNQEIKLDQVRSQIQAARVQSEQASNTCRQLLNGSNLRSLAEQGSKEIQTSMASSRGFIPDDREQSAPLMYTPEASFPKKSGHVEEDPRKSAAAAVAAKLTASTSSAQMLTYVLSSLASEGVIGNPMTESSADYHSEKRIKLENDQLPYIPSQNPQQQQQPLPESIQHNGSSTNQHSTPNEPPPLPSSSPPPLPPLPPIPQYSVPQFMQTTGSISSMAYSYGVAQQPSMQAYPPVGASLNAVSPFAPAQLSSYQGFQGSDGNYYSQPSSMPMAPMSRQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g1346 532 CDD CID_RPRD_like 29 138 - -
Lal8g1346 532 Pfam CID domain 32 130 IPR006569 -
Lal8g1346 532 MobiDBLite consensus disorder prediction 433 456 - -
Lal8g1346 532 Gene3D - 24 139 IPR008942 -
Lal8g1346 532 MobiDBLite consensus disorder prediction 402 458 - -
Lal8g1346 532 ProSiteProfiles CID domain profile. 1 144 IPR006569 -
Lal8g1346 532 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 23 532 - -
Lal8g1346 532 SMART 558neu5 31 140 IPR006569 -
Lal8g1346 532 MobiDBLite consensus disorder prediction 505 532 - -
Lal8g1346 532 MobiDBLite consensus disorder prediction 402 432 - -
Lal8g1346 532 PANTHER OS01G0925000 PROTEIN 23 532 - -
Lal8g1346 532 Coils Coil 247 281 - -
Lal8g1346 532 SUPERFAMILY ENTH/VHS domain 47 127 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g1346 Lal-Chr8 17229280 17242794 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g1346 K15559 - gmx:100806108 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1346 8 17229280 17242794 Lal8g1346 8 17229280 17242794 ECH
Lal24g1242 24 13720660 13730197 Lal8g1346 8 17229280 17242794 ECH
Lal8g1346 8 17229280 17242794 Lal25g1172 25 15169641 15177869 LSH