Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g1242 ATGTATTTCTTAAACATACAACCAGCACTATCCCGTTTGTGTATTACTCACCGGAAGAGAGCAAAAGAAATAGTTGAGACATGGGATAAATTGTTCAATTCTTCCCAGAAAGAACAGCGCGTCTCTTTTCTATACTTGGCTAATGACATCTTGCAAAATAGTAGGCGGAAGGGGAGTGAGTTTGTCAATGAATTCTGGAAATTTCTTCCAGCAGCTTTAAGGCACGTTAATGAAAGTGATGAACATGGAAAGAAAGTAGTAGCCAGACTTGAAGTAGAACTGAAACAGTTAGCAGTTCTTTATGTTTCTACATTTTACATGGTATCAATCGTCTCCATGGTTAGCGCTGATTCCAATCCTCCTGTGGCTGCTGATTCTCCTCCACACTCATCTTCTACTTTTCCGATTCAAGCTTTTTCTCCTACCTTTGCTCTTCCAATTACGAAGTTAATGGAGAAGAATTACCTCACTTGGAGCCAATTAATGTTGGCGGTTCTAAAAGCCAACAAATATGTTAGATTTATGTGTAATCCTGGAATTCCTCCACGGACTAAGCATATTAAATTGGATGTATTATTTGTTAGAGACAAAATCCAACCCAAGGTTGACATATGGGATGAGAGGAAGGTTTTTGGTTCACGGGGTCATGGTCTAAAGGATGAAATGATGGGTAAGAGCCCCGTTCCAGTTGCATCCTCGACAATCAATGCGAAGAGTTCAAATTCTATCAAGATAGTGAAGAGGGATACCCACTCAGTGAGATTTAAACTCGCTGTTGGCTGTTTGCCTGAAAAAATACTAACAGCATTGCACTCTGTTCTTGATGAACATCTTAATGAGGAAGCTGCCTTAAACAAGTGTAACAATGCTGTACGTCAAGTGTGTAAACTTGTTGAAGATGTTGAAAATACATTGGCTCAAGGAAATCAGCTGGGATCCACATTGGTAAATGACTTGGAAGAACAGGAAAATGAGCTTATGCAATATATGATGCAACTTGAAAATGGTGAGGCAGCAAGGACTACTTTGCTTTCCCAGCTTAAAGACGCACTGCTCGAACAGGAAGCAAGGCAAGAGTTTGTTCACAACCAGTTGCTAGCTGCACGAGACCAGATGGAGCAAGCTGCCACTATCAAGAAGAGGCTTAGCCAAGCACCAGAAGCAACGAAAGTATCGGAACGAAATCTTCCATCAGTCCAGCTAAACAGCACTCCTCCTCAGCCTTCTTTTATCCAACCTTCAATGTCATTTGCTCCTCTCCAAACTGCTGAAGACGATAAGAAGGCAGCGGCTGCTGCTGTTGCTGCTAAGCTTGCTGCCTCTACATCCTCTGCTCTCATGCTTACCTCTATTCTATCTTCCCTCGTTGCCGAAGAAGCTGCATCCATGAATGATAGCTTAAATTCTACTGGATTTACTTCAGGATTGCCTGATTTCAACCCAGAGAAAAGACCCAGACTTGAAAAACCAATGCCCGCTTCTGATGTTAACGGTTCTGATACAGGGAGCACTTTTTTTGCCTCTTCACAACAGTCGTCTGTTGCAAATGTGCCACCTATATCATCAACTAGTATGCAACCCATGTCACCACTCAATCAATTACAAGCTGCATTTGTTTCCGGACCCCATCCGGTGAATCCATCGGCAAATCAATATGCACAATCTACTGGTTTAATGGTTGGGGGAGTTCCTTATGGATATGGATCGAGTAACCTACCACCTCCACCTCCGTTGCCTCCACATGTGGCAATAGGGTTCTCGAGATCCAGCACTCAGCCACAGCAGTCACATGGGCAGCAAGCACAGCAGCAACAGCCGTCATCGACTGGAGGGTTTTACAGGCCACCAGGCATAGGGTTTTATGGGCAAAGTCATCCGTCGACACCACCAGCGCCAGTGCCTAGGCAGTGA 1911 0.4385 MYFLNIQPALSRLCITHRKRAKEIVETWDKLFNSSQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKFLPAALRHVNESDEHGKKVVARLEVELKQLAVLYVSTFYMVSIVSMVSADSNPPVAADSPPHSSSTFPIQAFSPTFALPITKLMEKNYLTWSQLMLAVLKANKYVRFMCNPGIPPRTKHIKLDVLFVRDKIQPKVDIWDERKVFGSRGHGLKDEMMGKSPVPVASSTINAKSSNSIKIVKRDTHSVRFKLAVGCLPEKILTALHSVLDEHLNEEAALNKCNNAVRQVCKLVEDVENTLAQGNQLGSTLVNDLEEQENELMQYMMQLENGEAARTTLLSQLKDALLEQEARQEFVHNQLLAARDQMEQAATIKKRLSQAPEATKVSERNLPSVQLNSTPPQPSFIQPSMSFAPLQTAEDDKKAAAAAVAAKLAASTSSALMLTSILSSLVAEEAASMNDSLNSTGFTSGLPDFNPEKRPRLEKPMPASDVNGSDTGSTFFASSQQSSVANVPPISSTSMQPMSPLNQLQAAFVSGPHPVNPSANQYAQSTGLMVGGVPYGYGSSNLPPPPPLPPHVAIGFSRSSTQPQQSHGQQAQQQQPSSTGGFYRPPGIGFYGQSHPSTPPAPVPRQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g1242 636 Coils Coil 316 339 - -
Lal24g1242 636 MobiDBLite consensus disorder prediction 388 405 - -
Lal24g1242 636 Pfam CID domain 7 90 IPR006569 -
Lal24g1242 636 MobiDBLite consensus disorder prediction 468 488 - -
Lal24g1242 636 MobiDBLite consensus disorder prediction 383 405 - -
Lal24g1242 636 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 201 636 - -
Lal24g1242 636 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 9 90 - -
Lal24g1242 636 SMART 558neu5 3 152 IPR006569 -
Lal24g1242 636 SUPERFAMILY ENTH/VHS domain 9 78 IPR008942 -
Lal24g1242 636 MobiDBLite consensus disorder prediction 570 636 - -
Lal24g1242 636 MobiDBLite consensus disorder prediction 585 611 - -
Lal24g1242 636 Gene3D - 5 100 IPR008942 -
Lal24g1242 636 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 9 90 - -
Lal24g1242 636 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 201 636 - -
Lal24g1242 636 ProSiteProfiles CID domain profile. 1 122 IPR006569 -
Lal24g1242 636 CDD CID_RPRD_like 6 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g1242 Lal-Chr24 13720660 13730197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g1242 K15559 - gmx:100791478 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1242 24 13720660 13730197 Lal24g1242 24 13720660 13730197 ECH
Lal24g1242 24 13720660 13730197 Lal8g1346 8 17229280 17242794 ECH