Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1172 ATGAGTAGCACATTCAATCCGCAGATTCTAGTGGAAAAACTTGCAAAGCTGAATGGTTCTCAGACCAGCATAGAGACCAAACAAGTTGTTGAAACATGGGCGAGACAATTTCATTGTTCTCCCCGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATCCTACAGAACAGCCGGAGAAAGGGTTCTGACTTTGTAGGTGAATTCTGGAAGGTTCTTCCTGATGCTCTTCGAGATGTGATTGCAAACGGAGACGGGTTTGCGAGGAATGCTGCACTTCGTCTGATTGGTATATGGGAAGACAGAAAGGTTTTCGGTTCTCGCGGTCAACTTCTTAAGCAAGAGTTTGTTGGGAGGCATGTGGAAAATAACAGCCGAGATGTGAAAGCTATGAACATGAAACTGAGGCCATCTGCCGGGAATGCTTTGGGGAAAATAGTTTCAGGCTATCATGTTATTTATGGAGAGCAGACAGATGAAGATGCTGTGTTGAGTAAATGCAGGAATGCTATTAGCTATCTCGAAAAAGCAGATAAGGAAATAGGCCATGATAGGAAATTCCATGGATCTGCACTAGTGGATGAGCTTGAGGGGCAAAATGCTGTACTGAGGGACTGCATTGAACAACTAACTGCAATAGAATCATCAAGAACTACCCTTGTGTCTCACCTGAGAGAGGCTCTCCGCGATCAGGAAATCAAGCTTGGTCAAATCCGTAGCCAGATTCAGGCTGCGCGTGTTCAGTCAGAACAGGCTAATATTACCTGCCGACAACTACTGAATGGCAACAATATTCAGTCATTAGCTGATCAGGGCTTGAAGGAAATTCAAACCTCCATGGCATCTGGTGGTTTTATTTCTGATGATAGGGAGCAATCTGCTCCATTAATGTACACACCGCAAGCGTCGTTTCCTGAAAAATCTGGAGACATCGAGGGAAATACGCGCAAGTCTGCAGCTGCTGCAGTTGCAGCGAAACTGACTGCTTCAACTTCGTCTGCACAGATGCTGTCTTACGTGCTATCCTCCCTAGCATCTGAAGGTGTTATCGGCAATCCGATAGAAGAGTCTTCTGGTGATTACCATTCTGAGAAGAGGATGAAGCTTGAAAGTGATCAGTCAGCTTATATACCATCTCCGAATCCTCAACAACAACCGATTCCTCTCTTTTCACTTCCTGAATCTATTGAACATAACAGATCATCTACCAACCAGCAAGGTACTCCCATCGAACCACCGCCGCCACCACCACCACCGTCATCATCACCACCTCCATTGCCACCACCACCGCCAATGCCGCTTTACTCAGTGCCACAGTTCATGCAGACTGCTGGATCATTTAGCACTATGACATACAGCTATGGCGTGGCACAACAGCCATTGATGCAAACCTATCTACCGGTTGGGTCTTCACTGAATGATGCCTCCCCTTTTGCTCCTGCTCCAATGAGTGCATATCAGGGTTTTCAGGGTTCAGATGGAAACTACTATAACCAGCCCTCATCGATGCCTATGGCTCCGATCTCCCGACAATAA 1539 0.4613 MSSTFNPQILVEKLAKLNGSQTSIETKQVVETWARQFHCSPREKRLAFLYLANDILQNSRRKGSDFVGEFWKVLPDALRDVIANGDGFARNAALRLIGIWEDRKVFGSRGQLLKQEFVGRHVENNSRDVKAMNMKLRPSAGNALGKIVSGYHVIYGEQTDEDAVLSKCRNAISYLEKADKEIGHDRKFHGSALVDELEGQNAVLRDCIEQLTAIESSRTTLVSHLREALRDQEIKLGQIRSQIQAARVQSEQANITCRQLLNGNNIQSLADQGLKEIQTSMASGGFISDDREQSAPLMYTPQASFPEKSGDIEGNTRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPIEESSGDYHSEKRMKLESDQSAYIPSPNPQQQPIPLFSLPESIEHNRSSTNQQGTPIEPPPPPPPPSSSPPPLPPPPPMPLYSVPQFMQTAGSFSTMTYSYGVAQQPLMQTYLPVGSSLNDASPFAPAPMSAYQGFQGSDGNYYNQPSSMPMAPISRQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1172 512 ProSiteProfiles CID domain profile. 1 122 IPR006569 -
Lal25g1172 512 MobiDBLite consensus disorder prediction 489 512 - -
Lal25g1172 512 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 512 - -
Lal25g1172 512 SUPERFAMILY ENTH/VHS domain 25 105 IPR008942 -
Lal25g1172 512 Gene3D - 2 117 IPR008942 -
Lal25g1172 512 MobiDBLite consensus disorder prediction 351 370 - -
Lal25g1172 512 SMART 558neu5 9 118 IPR006569 -
Lal25g1172 512 MobiDBLite consensus disorder prediction 409 437 - -
Lal25g1172 512 CDD CID_RPRD_like 7 116 - -
Lal25g1172 512 MobiDBLite consensus disorder prediction 487 512 - -
Lal25g1172 512 MobiDBLite consensus disorder prediction 400 438 - -
Lal25g1172 512 Pfam CID domain 9 108 IPR006569 -
Lal25g1172 512 PANTHER OS01G0925000 PROTEIN 1 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1172 Lal-Chr25 15169641 15177869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1172 K15559 - gmx:100806108 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1172 25 15169641 15177869 Lal25g1172 25 15169641 15177869 ECH
Lal10g0171 10 1983461 1991342 Lal25g1172 25 15169641 15177869 ECH
Lal8g1346 8 17229280 17242794 Lal25g1172 25 15169641 15177869 LSH