Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0864 ATGCAGCTGCATATATCTCAAAGTTTGAGGCATGTTACTTTCCTTCAAGGCAAAGGGTTAAAGGAATTTATCAAAGTGAAGGTTGGGTCAAGGAGGGTTTCTTATAAGATGCTCTTCTATTCACTCTTGTTCTTCACTTTTCTTCTCTGGCTTGTGTTTGTTTTCACATCAGTGGATGGCAATGATGATGGAGAAAACAAGTGCTCTAACGTAGGTTGCCTAGGAAAAAAACTAGGGCCAAGGATTTTGGGAAGAAGCCCTGAAACAAATATTCCAGAAATCATATACCAAACTTTAGATGAACCCCTTAGCAAAGATAAACTACAGGGAAGGACAGATATTCCACAGACTTTAGAAGAGTTCATGATTGAAATGAAGAAAGGTGGATATGATGCTAAGACATTTGCAGTTAAACTTAGAGAAATGGCCAAAATCCATGAATATCTATATCGTCATTTAGAATCGAGCAGCATACCAAAACAACTTTACTGCCTCACCCTGCAGCTGGCTAATGAGCACAGCAAGAATGCAGCAGCGCGCCGTCAGCTTCCATATGCAGAACTAGTCCCTGCCCTGGTTGACAATTCTTACTTCCACTTTGTCCTTGTCTCAGACAATGTGCTCGCCGCATCTGTGGTTGCAAAATCACTTGTCTGCAACTGTTTGCGATCTCACAAAGTTGTTTTGCACATAATTACAGATAAAAAGACCTATTATCCGATGCAGGCTTGGTTCTCAATGCACCGAATATCGCCTGCTATAATTGAGGTCAAGGCATTGCACCATTTCGATTGGCTTACGAAAGGAAAGGTGCCTGTTCTAGAAGCAATGGAGAAAGATCAAAAGGTCCGGTCAAAGTTTAGAAGGGGTTCATCAACTATAGTTGCAAATACCATTGAGAAGCCAAATGCTATTGCAGCAAAGCTACAAGCACTCACTCCCAAGTATAATTCATTGATGAACCACATCCGCATACATCTTCCAGAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGACGAGGACATAGTGGTACAAACTGATCTTACACCATTGTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGTAGCGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAACTACTTGAACTTCTCCCACCCTCTAATATCCGAAAACTTCGATCCCAACGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAACACCAATATAAGCCTAACATACTATTACTGGGTTGAGCAGAATATAAAATCAGACCTGAATCTGTGGCAGCTAGGGACCTTACCTCCCAGGTTGATAGCATTTCTTGATCATGTCCACTTCATTGATCCTTTCTGGCATATGCTGGGATTAGGATATCAAGAAAATATAAGTTTTGAAGACGCTGAGAGTGCCGGTGTCATACATTTCAACGGCAGGGCAAAGCCATGGCTAGAATTAGCTTTTCCTCACCTAAGACCGCTGTGGACTAAGTATGTCCACTTTTCAGATAAGTTCATTAAGAGCTGTCACATTAGGGCATGGTAG 1575 0.4165 MQLHISQSLRHVTFLQGKGLKEFIKVKVGSRRVSYKMLFYSLLFFTFLLWLVFVFTSVDGNDDGENKCSNVGCLGKKLGPRILGRSPETNIPEIIYQTLDEPLSKDKLQGRTDIPQTLEEFMIEMKKGGYDAKTFAVKLREMAKIHEYLYRHLESSSIPKQLYCLTLQLANEHSKNAAARRQLPYAELVPALVDNSYFHFVLVSDNVLAASVVAKSLVCNCLRSHKVVLHIITDKKTYYPMQAWFSMHRISPAIIEVKALHHFDWLTKGKVPVLEAMEKDQKVRSKFRRGSSTIVANTIEKPNAIAAKLQALTPKYNSLMNHIRIHLPELFPSLNKVVFLDEDIVVQTDLTPLWDIDMNGKVNGAVETCSGEDKFVMSKRLKNYLNFSHPLISENFDPNECAWAYGMNIFDLEAWRNTNISLTYYYWVEQNIKSDLNLWQLGTLPPRLIAFLDHVHFIDPFWHMLGLGYQENISFEDAESAGVIHFNGRAKPWLELAFPHLRPLWTKYVHFSDKFIKSCHIRAW 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0864 524 CDD GT8_like_1 198 509 - -
Lal8g0864 524 Pfam Glycosyl transferase family 8 197 496 IPR002495 GO:0016757
Lal8g0864 524 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 200 516 IPR029044 -
Lal8g0864 524 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 522 IPR029993 GO:0047262
Lal8g0864 524 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 522 - -
Lal8g0864 524 SUPERFAMILY Nucleotide-diphospho-sugar transferases 199 521 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0864 Lal-Chr8 6287265 6294893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0864 1 523 Glycosyltransferase AT5G54690 73.783 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0864 K20867 - gmx:100802623 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0649 10 14310725 14314432 Lal8g0864 8 6287265 6294893 LSH
Lal8g0864 8 6287265 6294893 Lal1g0536 1 3448585 3452187 PCT
Lal1g0536 1 3448585 3452187 Lal8g0864 8 6287265 6294893 PCT