Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0649 ATGCAGCTGCATATATCTCCAAGTTTGAGACATGTTAGTGTGCTTCATGGAAAAGGGTTAAAGGAATTTATCAAAGTGAAGGTTGCATCAAAGAGACTTTCTTGTAGGAAGCTTTTCTATTCTATCTTGTTCTTCACTTTTCTTCTCAGGTTTGTATTTGTTTTGACATCAGTGGATGTCATTGATGGAGAAAACAAGTGCTCTACCATAGGTTGCCTAGGGAAAAAACTAGGGCCAAGGATTTTGGGAAGAAGCCCTGAATCAACTGTTCCAGAAGTGATCTACCAAACATTACAAAAACCCCTTAGCAAGGATGAACTACAGGGAAGGTTAGATATTCCACAAACTTTAGAAGACTTCATGGTAGAAATGAAGAAAGGTGGATATGATGCTAAGACATTTGCAGTTAAACTTAGAGAAATGGTAATCCTTATGGAACAAAGGACTAGGATGGCCAAAATCCAAGAATATCTATATCGTCATGTAGCATCAAGCGGCATACCGAAAAAACTTCACTGCCTTGCCTTGAGGCTGGCCAATGAGCACAGCAACAATGCTGCAGCACGCCTTCAGCTTCCAACAGCAGAACTAGTCCCTGCGCTGGTCGACAATTCCTACTTCCACTTTGTCCTCGCCTCAGACAATGTGCTTGCCGCTTCTGTGGTTGCAACATCACTTGTCCGCAACTGCTTGCAACCTCAGAAAGTTGTCTTGCACATAATTACAGATACGAAGACTTATTATCCCATGCAGGCTTGGTTCTCATTGCACCCTCTATCACCTGCTATAATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTACAAAGGGAAAGGTGCCTGTCCTGGAAGCAATGGAGAAAGATCAAAAGGTGCGGTCACATTTTAGAGGGGGGTCATCAGCTATAGTTGCAAATACCACAGAGAAGCCAAATGTTATTGCAGCAAAGCTACAAGCACTCGATCCCAAGTATAATTCAGTGATGAACCACATCCGCATACATCTTCCAGAGTTGTTTCCAAGTCTTAACAAAGTGGTCTTCCTAGATGACGACGTTGTGGTACAAACTGATCTTACACCTTTGTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGCACTGGAGAAGATAAGTTTGTAATGTCAAAGAGGTTGAAAAGCTATTTGAACTTTTCACACCCTCTAATATCCGAAAATTTCAATCCTAATGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAACATAAGCTTAACATACCATTACTGGGTTGAACAGAATATAAAATCAGACCTGAGTTTGTGGCAGCTAGGAACATTACCTCCTGGATTGATAGCATTTCATGATCATGTCCACATTATTGATCCTTTTTGGCATATGCTGGGATTGGGATATCAGGAAAATACAAGTTTCGCCGATGTTGAGAGTGCTGGTGTCATACATTTCAATGGCAGGGCAAAACCATGGCTAGAAATAGCTTTTCCGCAGCTAAGGCCACTGTGGACTAAGTATGTTGACTTTTCAGATAAGATCATCAAGAGCTGTCACATTAGGGCATCATAG 1602 0.4164 MQLHISPSLRHVSVLHGKGLKEFIKVKVASKRLSCRKLFYSILFFTFLLRFVFVLTSVDVIDGENKCSTIGCLGKKLGPRILGRSPESTVPEVIYQTLQKPLSKDELQGRLDIPQTLEDFMVEMKKGGYDAKTFAVKLREMVILMEQRTRMAKIQEYLYRHVASSGIPKKLHCLALRLANEHSNNAAARLQLPTAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNCLQPQKVVLHIITDTKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSHFRGGSSAIVANTTEKPNVIAAKLQALDPKYNSVMNHIRIHLPELFPSLNKVVFLDDDVVVQTDLTPLWDIDMNGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLISENFNPNECAWAYGMNIFDLEAWRKTNISLTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHDHVHIIDPFWHMLGLGYQENTSFADVESAGVIHFNGRAKPWLEIAFPQLRPLWTKYVDFSDKIIKSCHIRAS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0649 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Lal10g0649 533 Pfam Glycosyl transferase family 8 175 506 IPR002495 GO:0016757
Lal10g0649 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 527 IPR029044 -
Lal10g0649 533 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
Lal10g0649 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0649 Lal-Chr10 14310725 14314432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g0649 1 533 Glycosyltransferase AT5G54690 78.131 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0649 K20867 - gmx:100802623 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0649 10 14310725 14314432 Lal8g0864 8 6287265 6294893 LSH
Lal10g0649 10 14310725 14314432 Lal1g0536 1 3448585 3452187 PCT
Lal1g0536 1 3448585 3452187 Lal10g0649 10 14310725 14314432 PCT