Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0509 ATGGCAAGGAAGATGCTTTGTGCCCCTCAAGATATAGGTAACGATAGTCCAAAAGTTTCAGAAGCAGGAAAGGATTCCACATCGACGATATATCAGCAACAAAATAAACACACATCTTTGGAGAATTGTGAAGAATCTTCGCTTTCAAGGATTAAATCTGGTAGTAGGTGTGCCGTCATCTCATTCCTTAATTTTGAGCCTGACGGGACTTGGAGAGTTATTGCCGTACCAGTGAGGGTTTTCAATCATATTAACCTTCATTCTGGTGTAAATATGGACAGTCTGCAACTTATTTCCCCACCACCTCTTAACCGGTTAAAGATTGATCAATGTAAGGGGCCAAGAGGACCTCCACTTCCCTATGCTTATTCAGCCAAACAATTTACAAGAAGCAATACTGGGTCAAATGTGCATCGTCGATATCAAAACAAGATTGCTAACAGTGCTTCTAAATCGAATGAACTCCATAGGAATTCTTGTTCCGGAAGTTCATCAGTCTGCAGCTATGGCTCGCTCCCTGATAGTTCTGATGTGGTTAGTTCATCCGATAAGTTCACGAGTAATTCCAAGGCAGATAAGTCTCTGAAGAAAAACTCAAGAAAAAAGATAAGAAAGAAAGTTAAACAGGGCAAGAAGCAGTCACTTGACAATGGCCCTACCGAACGGGAAGCTCTTAATGAGGAATATGTCTGTGTAAGTTTGACTTCTGAAAGTTGCAGTAGCAACGATGTGGATAAGGAGGTTGGGCTGATGTTGTATACAACTGAACTAGAATCTTCATCTTCTGATGATAGACTAATAAAAAATGACCGTGAAAGAAATGAGATGTATGATGTTGTCAACATTATGGAAGCTCCAAAAAGTTGCAACTCTTTTATTGATGAGATAGAGATGTTGAAAGCTACCACACCTAATATTCAGAATTCTGCTGGAGAATATGCCACCTTTGAATCCAATAATCAGCTTCAAGATAGTAGCCCTGATTTATTAGTCGTGGATGGAGAAACAAAGGATATTCCACAAGCTGATCTATACTGTTTTAATGATATAAAAGACATTTCGGTCTTGGGTTCTTTTTCAATTGGTTCAAAAAGTGAAGAAAGTATCAAAGCTGGTGATATAGGAAAACGATCCAACAAGGCAAGGCGCAAAATCACTTCAAGTTCAGGAGATGGGTATTTTCTTGGTCAAAATGTAACGAATGGAAATCCTAATAATGGTGCACACAATGAGGGAGTTAGGCATGGTGGTCAAGACTGCTTTGGTAATGATATCCAAGCTAAGCAAAAGAGAACAGTGTCAAAGAGTTCAAGTTTCAGCAAATTTGGTGGTGTTGGGATTTCGCACGGTCAAGCAGGGAAGGAAAACAGTCATTCTGTCTGGCAAAAGGTTCAGAAGAACAATTCTGTTGAATGTGGTGATAGTGATTTGAAGAAAGTAAACACAACTTTGTCACAGTTTGGTTCTCCAGTGAGAAGGGATCCTCCAGTCATCAGAAAATCTGGTCCTGCTAGTGAAAATTTTCTATCAAAGATGGAGGATAAAAAACAATTTAAAAATAAAGCTGGTCAGAAATCAAAAGGGAAAATGGACTCGGTTTCAAAAAAAGAAGAGTCCAGTTATTCAAGGGAGGGTTCTCATTTTAACCGGTCCATGTTAAATGATGATGTGAAGGTTACTGTTCAACAGAATGATAATAATCAACAAGGATTGAGCAATGTCTCTGGATTTAATTCCGATATTAATTGCATGATGTATGGGTTCCAGACCAACAGAGTTGAACAGATAACATCTGAAGTAGTTCACAGTGCAGAATTTCATCTTGAAGAATCGGATCCCCAAACAAGTCCCTTCCATACTATTGCAAACATGAAGAATGAAAACACAGACATTCAACATAGTCCATTGCCAATACCAGGTGCAAAAATCAAACCGTCAAATATGTGTGAGGAGCAACATCCAGTGTCATATAATCATTTAGGTGATGAGGTTGTTCAAACAGAGAAAGGAGTTTCTTCCGTGGACAACAATGCACATCACCACAGTTCTGTATCCACCCTTTGGAAATGGATACCGATTGTGAAGAAGGATACAGCATTGGCAGAATCTAAATCTAAAAGTTCATTGCCAGAACTTTCTGATGCACCATCTTGTAAAAATTCTATCTTGGAAAGCAGTGTTGAACCAAGAGTGGCTTCCTTTTCTCAAAATCGGGATTCGTCGTTAAATGTAAGCAGAACATTTATAGGTCGGATGTCTAGTAAAATGTCTTGTCTAGATGAGGGTGAGAATCAGAACTTGGGGAAGCAAGTTGCATGTACATTAACAGAGCACGGGGACAAGCATGCATTAGCTAATCACGTAATTCATGCATGTCATAATCAAGATGCATTAGAAAATGATTCCTGCACAATATCTCAAGCTGTGAATAATGCCCGCAGGACACAACTAGCTTGTGAAGCTGTACACATGGCCACAGGTGGCCCAATTGCGGAGTTTGAAAGACTGCTTCATCTTTGTAGTCCTGTTATTTGTCAACCAGCAGATTCAGTCAGTTGTTTGACCTGCTCACATGACCATGCTGATGGTGCCTCACTATGCAGACATGAGATGCTTGATCTATCTTTGCGATATCTGTGGCTGTGGTATGAGAAACACGGGAGCTATGGATTAGAGGTAAGGGCTCAGGATTATGAATATTCCAAGAGAGTAGGTGGTGCTGATCACTTTCCATTTCGGGCTTATTTTGTACCTTCATTATCAGCAGTTCAGCTGTTTAAGAGCAGTAAAAATCAATGTGTGAATAGCAGTGAAATGACTGCCATTTCAGAACACTCACCTACTACCAGTAAACATCCAATTTTTTCTGTTCTCTTTCCTAAGCCTCGCAATCAGAATGCAAGCATTCAAACACCAACTATGATATCTTCTATCAACAATGCATCTAATTCATCTGTCTACTCAACATGCTCTCGTGATTTAGAGCTTCTTTTTGAATATTTTGAGCTTGAACAACCTCAACAAAGACAACCTCTATATGAGAAGATAAAGGAGCTGGTTAGTGGTGCTATACCAATCCACTCTAAAACCTATGGCGACCCAACTAAACTAGATTCAATAAACCTACAAGATCTTCACCCTAGTTCTTGGTACTCGGTTGCATGGTATCCTATTTACCGTATACCAGATGGGAACTTTCGTGCATCCTTTTTGACTTACCATTCACTTGGACATTTGGTTTGTAGAAGTACAAATTCCGATTGCCCAGCTTTAGGTTCTTCCATAGTATCTCCAGCTGTGGGTCTTCAAAGTTACAATGCCCAGGGTGAATGCTGGTTCCAACTGAAGCATTCTGCACTGGAAACAGAAACCCCGGGCTTAAATCCTTCATTACTTCTTAAAGAGCGATTGCATATTCTTGAGGAAACGGCATCCATTTTCGCAAGAGCTGTTGTCAACAAGGGGAATCAAATCTGCACAAATAGGCATCCTGACTATGAGTTTTTCCTCTCTCGGCGACGACATTGA 3528 0.4002 MARKMLCAPQDIGNDSPKVSEAGKDSTSTIYQQQNKHTSLENCEESSLSRIKSGSRCAVISFLNFEPDGTWRVIAVPVRVFNHINLHSGVNMDSLQLISPPPLNRLKIDQCKGPRGPPLPYAYSAKQFTRSNTGSNVHRRYQNKIANSASKSNELHRNSCSGSSSVCSYGSLPDSSDVVSSSDKFTSNSKADKSLKKNSRKKIRKKVKQGKKQSLDNGPTEREALNEEYVCVSLTSESCSSNDVDKEVGLMLYTTELESSSSDDRLIKNDRERNEMYDVVNIMEAPKSCNSFIDEIEMLKATTPNIQNSAGEYATFESNNQLQDSSPDLLVVDGETKDIPQADLYCFNDIKDISVLGSFSIGSKSEESIKAGDIGKRSNKARRKITSSSGDGYFLGQNVTNGNPNNGAHNEGVRHGGQDCFGNDIQAKQKRTVSKSSSFSKFGGVGISHGQAGKENSHSVWQKVQKNNSVECGDSDLKKVNTTLSQFGSPVRRDPPVIRKSGPASENFLSKMEDKKQFKNKAGQKSKGKMDSVSKKEESSYSREGSHFNRSMLNDDVKVTVQQNDNNQQGLSNVSGFNSDINCMMYGFQTNRVEQITSEVVHSAEFHLEESDPQTSPFHTIANMKNENTDIQHSPLPIPGAKIKPSNMCEEQHPVSYNHLGDEVVQTEKGVSSVDNNAHHHSSVSTLWKWIPIVKKDTALAESKSKSSLPELSDAPSCKNSILESSVEPRVASFSQNRDSSLNVSRTFIGRMSSKMSCLDEGENQNLGKQVACTLTEHGDKHALANHVIHACHNQDALENDSCTISQAVNNARRTQLACEAVHMATGGPIAEFERLLHLCSPVICQPADSVSCLTCSHDHADGASLCRHEMLDLSLRYLWLWYEKHGSYGLEVRAQDYEYSKRVGGADHFPFRAYFVPSLSAVQLFKSSKNQCVNSSEMTAISEHSPTTSKHPIFSVLFPKPRNQNASIQTPTMISSINNASNSSVYSTCSRDLELLFEYFELEQPQQRQPLYEKIKELVSGAIPIHSKTYGDPTKLDSINLQDLHPSSWYSVAWYPIYRIPDGNFRASFLTYHSLGHLVCRSTNSDCPALGSSIVSPAVGLQSYNAQGECWFQLKHSALETETPGLNPSLLLKERLHILEETASIFARAVVNKGNQICTNRHPDYEFFLSRRRH 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0509 1175 MobiDBLite consensus disorder prediction 367 417 - -
Lal8g0509 1175 MobiDBLite consensus disorder prediction 509 544 - -
Lal8g0509 1175 MobiDBLite consensus disorder prediction 483 551 - -
Lal8g0509 1175 MobiDBLite consensus disorder prediction 20 37 - -
Lal8g0509 1175 MobiDBLite consensus disorder prediction 1 37 - -
Lal8g0509 1175 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 26 1174 - -
Lal8g0509 1175 MobiDBLite consensus disorder prediction 390 408 - -
Lal8g0509 1175 MobiDBLite consensus disorder prediction 176 221 - -
Lal8g0509 1175 MobiDBLite consensus disorder prediction 195 209 - -
Lal8g0509 1175 Pfam Protein of unknown function (DUF789) 831 1169 IPR008507 -
Lal8g0509 1175 PANTHER DUF789 FAMILY PROTEIN 26 1174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0509 Lal-Chr8 3492333 3500162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0509 - - aprc:113867773 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0509 8 3492333 3500162 Lal8g0509 8 3492333 3500162 ECH
Lal8g0509 8 3492333 3500162 Lal25g0520 25 3711888 3717632 LSH
Lal8g0509 8 3492333 3500162 Lal10g0907 10 16506457 16513595 LSH