Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0907 ATGGCGAGGAAGATGCGTTGTGCCCTTCAAGGGATAGGTAACGATAGTCCAAAAGTTTCAGAAGCAGGAAAGGATTCCATATCAACACTATATCAACAACAAAATAAACTCGCATCTTTGGAGGTTTGTGAAGGATCTTCCCTTTCAAGGATTAACTCTGGTAACAGGTGTGCCGTCATTTCATTCCTTAATTTTGAGCCTGATGGTACTTGGAGAGTTATTACCACACCAGTGAGGGTTCTCAATCATATTAACTTGGCTTCTAGCGTAAACATGGACGGTCTGCAACTTCTTTTCTCGCCACCTCTTAATCGATTGAAGATTGATCGATGTAAGGGGCCAAGAGGACCTCCACCTCCCTATGCTTATTCAGCCAAACCATTTACAGGAAGAAGCATTACTGGGTCAAATGTGTATCGTCGATGTCAAAATAAGATTGCCAACAAAGCTTCTAAACAGAATGAACTCCCTAAGAATTCTTGTTCTGAAAGTTCATCAGTCTGCAGCTCTGGCTTGTTCCCTGATAATTCTGCTGTGGTTAGTTCATCCGATAAGTTCACGAGTAATTCCAAGGCAGGCAAGCCTCTGAAGAAAAACTCAAGAAAAAATATCCGAAAGAAAGTTAAACAGAATAAGAAGCAGTCACTTGACAATGGCCCTACTGAACGGGAAGCTCTTAATGAGGAATATGTCTGTGTAAGTTTGACTTCTGAAACCTGCAGCAGCAATGACGTGGATAAGGAGGCTGGGCTGATGTCGTATACAACTGAACCTGAATCTTCATCTTCTGATGATAGATTAATAAAAAATGACTGTGAAAGAAATGAGAATGACATTGTCGATATTATGGACCCTCCAAAAAGTTGCAACTCTTTTATTGATGAGTCGGAGATGTTGAAAGCTACTGCACCTAACATTCAGAATTCTGCTGGAGATTATGCCACATTTGAACCCAAGAATCAGCTTCAAGATAGAGTCCATGATTTAGAAGTCTTGGGTGGAGAAACAAAGGATATTCAACAGGTTGATATATACTGTTTTAATGATATACAAGACACCATGGTATTGGATTCGGTTTCAACTGGTTCAAAAAGTGATGAAAGTATCAAAGGTGATAATATAGGAAAACGGTCCAACAAGGCAAGACAGAGAATCGCCTCAAATTCAGGAGATGGGCAGTATCTTGGTCAACATGTAACAAATGACAACTGCAATAACGGTGAACATAACGAGGAAGTTAGGCATGATGGTCAAAATTGCTTTGGTAATAGTAGTAGAGCTAAGCAAAAGAGACCAGTGTCGAAGAGTTCAAGTTTCAACAAATTTGTGGGTGTTGGAATTTTACATGGTCGTACAGGGAAGGAAAACAACCATTCTGTCTGGCAAAGGGTTCAGAAGAGCAATTCTGTTGAATGTGGGGATGGTGATTTGAAGAAAGTAAGCACAACTTCGTCACAGTTTGGTTCCCCTGTGAGAAGGGATCCTTCACTCATCAGAAAATGTAGTTCTGCTAGTGATAATTTTCTATCGAAAATGGAGGATAAAAAGCAATTTAAACATAAAGGTGGTAGGAAATCAAAAGGGGAAATGGACCTGTTTTCAAAAAAAGAACCCTGCACTTATTCAAGGAAGGGTTCCTATTTTAACCCGTCCATGGTAAATGATAATGTGGAGGTTAGTGTTCAACATAATGACGATAATCAACAAGGATTGAGCAGAGTCTCTGGATTTAATTCCGACATTAATTACCTGGTGTCTGGTTTCCAGACTAACAGAGTTGAACTAGTTCACAGTGCTGACTTTCATCTTGAAGAATCAGATCCCCAATCAAGTGCCTGCCATACTGTTGCGAACATGAAGAATGAAAATAAAGGCATTCAACATAGCTCGTTGGCATTACCATGTGAAAACATGAATCAGTTAAATATGGAGGAGCAACATTCAGTGTCTTCTAATCATTTAGGTGATGAGCTTCTTGAAACAGAGAAAGAATTTTCTTCTGCAGACAACAGTGCACAAAACCACAGTTCTGGACCTACCCTTTGGAAATGGATACCGATTGCGAAAAAGGACACATCTTTGGCAAAATCTGAATCTAATAGTTTATTCACAGAATATTCCGATGCACCGTCCTGTAAGAATTCTAACTTGGAAAACAGTGTTGAACCAATAGTGGCTTCCCTTTCTCAAAATCAGGATTTATCACTAAATATAAGTAGAAAATGTGTAGGTCTGGTCCATAGTAAAATTTCTTGTCTAGATGAGGGAGAGAAGCAGAACATGGGGAAGCAGGTTGCATGTTCATTGACAGAGCACAGGGATAAGCATGAAGTAGCTAATCATGTAATTCATGAATGTCAGAATCAAGATACATTAGATAACGATTCCTACAGAATAGCTAAAGCTGTGAACGATGCCTGCAGGGCACAACTAGCTTGTGAAGCTGTACACATGGCCACAGGTGGCCCAATTGCGGAGTTTGAAAGATTTCTTCATTTTTGTAGCCCTGTTATTTGTCAATCACCTGATTCAGTCAGTTGTTTGGCCTGCTCACAGGACCATGCTGAAGGTACTTCACTATGCAGACATGAGATGCCTGACCTATCCTTGCGATACCTGTGGCAGTGGTACGAGAAACACGGGAGCTATGGGTTAGAGATAAGGGCTCAGGATTATGAATATTCAAGGAGACTGCATGGTGATGGTCAGTTTCCATTTCGGGCATATTTTGTACCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCGTAAAAATCAATGTTTGAATTGTAGTGACAAGTGTGAAATGAGTGACATTTCTCAACACTCATCTACTGTCAGTCAACATCCAATATTTTCTGTTCTTTTTCCTCAGCCTCACAATCAGAATGCAAGCATTCAAACACCAAAAAAGATGTTTTCTATCAGCAACGCATCCAATTCATCTGTTGACTCAACATGCTCTGGTGATTTAGAGCTTCTTTTTGAATATTTTGAGCTTGAACAACCTCAACAAAGACAGCCTCTATATGAGAAGATACAGGAACTGGTTAGTGGTGCTATACCAATCCAGTCCAAAACTTATGGGGACCCAACTAAACTGGATTCAATAAACCTGCAAGATCTTCACCCTAGATCTTGGTACTCGGTTGCATGGTATCCTATTTACCGGATACCAGATGGCAACCTTCGTGCATCTTTTTTGACTTACCATTCACTTGGACGTTTGGTTCGTAGAAGTTCAAATTCCAATTTCCCAAGTGTAGGTGCTTCCATAGTATCTCCAGCTGTGGGTCTTCAAAGTTACAATGCCCAGGGTGAATGCTGGTTCAAGCTGAAACATTCTGCAGTGGCAACAGAAGTTCTGGGCTTAAACCCTTCTTTACTTCTTAAAGAGCGTTTGCGGACACTTGAGGAAACCGCGTCCCTTATGGCAAGATCTGTTGTCAACAAGGGGAATCAAATGTGCACAAATAGACATCCTGACTATGAGTTTTTCCTCTCTAGGCGACGATATTGA 3519 0.4052 MARKMRCALQGIGNDSPKVSEAGKDSISTLYQQQNKLASLEVCEGSSLSRINSGNRCAVISFLNFEPDGTWRVITTPVRVLNHINLASSVNMDGLQLLFSPPLNRLKIDRCKGPRGPPPPYAYSAKPFTGRSITGSNVYRRCQNKIANKASKQNELPKNSCSESSSVCSSGLFPDNSAVVSSSDKFTSNSKAGKPLKKNSRKNIRKKVKQNKKQSLDNGPTEREALNEEYVCVSLTSETCSSNDVDKEAGLMSYTTEPESSSSDDRLIKNDCERNENDIVDIMDPPKSCNSFIDESEMLKATAPNIQNSAGDYATFEPKNQLQDRVHDLEVLGGETKDIQQVDIYCFNDIQDTMVLDSVSTGSKSDESIKGDNIGKRSNKARQRIASNSGDGQYLGQHVTNDNCNNGEHNEEVRHDGQNCFGNSSRAKQKRPVSKSSSFNKFVGVGILHGRTGKENNHSVWQRVQKSNSVECGDGDLKKVSTTSSQFGSPVRRDPSLIRKCSSASDNFLSKMEDKKQFKHKGGRKSKGEMDLFSKKEPCTYSRKGSYFNPSMVNDNVEVSVQHNDDNQQGLSRVSGFNSDINYLVSGFQTNRVELVHSADFHLEESDPQSSACHTVANMKNENKGIQHSSLALPCENMNQLNMEEQHSVSSNHLGDELLETEKEFSSADNSAQNHSSGPTLWKWIPIAKKDTSLAKSESNSLFTEYSDAPSCKNSNLENSVEPIVASLSQNQDLSLNISRKCVGLVHSKISCLDEGEKQNMGKQVACSLTEHRDKHEVANHVIHECQNQDTLDNDSYRIAKAVNDACRAQLACEAVHMATGGPIAEFERFLHFCSPVICQSPDSVSCLACSQDHAEGTSLCRHEMPDLSLRYLWQWYEKHGSYGLEIRAQDYEYSRRLHGDGQFPFRAYFVPSLSAVQLFKNRKNQCLNCSDKCEMSDISQHSSTVSQHPIFSVLFPQPHNQNASIQTPKKMFSISNASNSSVDSTCSGDLELLFEYFELEQPQQRQPLYEKIQELVSGAIPIQSKTYGDPTKLDSINLQDLHPRSWYSVAWYPIYRIPDGNLRASFLTYHSLGRLVRRSSNSNFPSVGASIVSPAVGLQSYNAQGECWFKLKHSAVATEVLGLNPSLLLKERLRTLEETASLMARSVVNKGNQMCTNRHPDYEFFLSRRRY 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0907 1172 MobiDBLite consensus disorder prediction 475 494 - -
Lal10g0907 1172 Pfam Protein of unknown function (DUF789) 825 1166 IPR008507 -
Lal10g0907 1172 MobiDBLite consensus disorder prediction 360 437 - -
Lal10g0907 1172 MobiDBLite consensus disorder prediction 417 437 - -
Lal10g0907 1172 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 5 1171 - -
Lal10g0907 1172 MobiDBLite consensus disorder prediction 380 404 - -
Lal10g0907 1172 MobiDBLite consensus disorder prediction 179 222 - -
Lal10g0907 1172 PANTHER DUF789 FAMILY PROTEIN 5 1171 - -
Lal10g0907 1172 MobiDBLite consensus disorder prediction 195 209 - -
Lal10g0907 1172 MobiDBLite consensus disorder prediction 179 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0907 Lal-Chr10 16506457 16513595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0907 - - aprc:113867773 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0907 10 16506457 16513595 Lal10g0907 10 16506457 16513595 ECH
Lal8g0509 8 3492333 3500162 Lal10g0907 10 16506457 16513595 LSH
Lal25g0520 25 3711888 3717632 Lal10g0907 10 16506457 16513595 LSH