Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0520 ATGGAGGTTAGTCCAATTCCTAGAGGAAGAGGGAGACCAAGAAAAACCACAGGCGAAATGGTTAAGAAATACTTAGAGGCAAGGAAGATGCCTTGTGCCCTTCAAGCGATAGGTAACGATAGTCTAAAAGTTTCAAAAGCAGGAAAGGATTCCATATCAACAATATATCAACAACAAAATAAACTCACTTCATTCGAGAATTGTGAAGAATCTTCGGTATCAAGGAGTAACTCCAGTAGTAGGTGTGCCGTCATTTCATTCCTTAGTTTTGAGCGTGATGGGACTTGGAGAGTAATTGCTGTGCCAGTGAAGGTTCTCAATCATATTAACTTGGCTTCGGGCATAAATATGGACGGCCTGCAACTTCTTTTTCCCCCACCTCTTAATCGGTTGAAGATTGATCAATGTAAGGGGCCAAGAGGACCCCCACCTTCCTATGCTTATTCAGCCAAACCATTTACAAGAAAAAGCATTACTGGGTCAAATGTGCATCGTCGATGTCAAAATAAGATTGCTAACAAAGCTTCTAAACCGAATGAACTCCCTGAGAATTCTTTTTCCAGAAGTTCGTCAGTCTGCGGTTCTGGCTTGTTCCCTGATAGTCCTGCTGTGGTTAGTTCATCCGATAAGCTCACGAGTAATACCAATGCTGATAAGTCTCTGAAGAAAAACTCAAGAAAAAAGATCAGAAAGAAAACTAGACAGAGTAAGAAGCAGCCACGTGACAGTGGCTCTACCGAACCGGAAGTTCTTAATGAGGAATCTGTCTCTGTAAGTTTGACTTCTGAAACCTGCAGCAGCAATGATGTGGATAAGGAGGTTGGGCTGATGTCGTATACAACTGAACCGGAATCTTCATCTTCTGATGATAGATTAATAAAAAATGACTGTGAAAGAAATGAGACGATCGACCGTGTCAATATTATGGAAACTCCAAAAAGTTGCAACTCTTTTATTGGCGAGGCAGAGATGTTGAAAGTTACTGTACCTAACATTCAGAATTCTGCCGGAGAATATGCCACATTTGAATCCAAGAATCAGTTTCAAGATAGAGGCCATGATTTAGAAGTTTTGGGTGGAGAAACAATGGATATTCAACAGGCTGACCTATACTGTTCAAATGATATACAAGACACTTTGGTGTTAGATTCTGTTTCAAATGGTTCAAAAAGTGATGAAGTTATCAAAGCTGGTGATATGGGAAAACGGTCCAACAAGGCAAGGCGCAGAACTGCTTCAAGTTCAGGAGATGGGTATTTTCTTGATCAAAATGTAACAAATGGAAATCGTACTAATAGTGAACATAATGAGGGAGTTAGGCATGGTGGTCAAAACTGTATTGGTAATGATATGGGAGCTAAGCAAAAGAGAACAGAGTCGAAGAGTTCGAGTTTCAACAATTTCGGGGGTGTTGGAATTTTGCATGGTCGAACAGGGAAGGAAAACAGTCATTCTGTCTGGCAAAAGGTTCAGAAGAAATGTTCTGTTGAATGTGGTGATGGTGATTTTAAGAAAGAAAACACAACTTTATCACACTTTGGTTCCCCTGTGAAAGGTGATCCTTCAGTCATCAGAAAATCTAGTTCTGCTAATGAAAATTTTCTACTGAAGATGGAGGATACAAAACAGTTTAAAAATAAAGCTGGAAGGAAATCAAACGGGAAAGCGGACCAGGTTTCAAAGAAAGAACATTGCAGCTATTCAAGGAAGGGTTCCCATTTTAACAGGTCCATGTTAAATGATAATACGAAGGATAGTGTTCAACAGAATGATATCTCATACCAGGAAAATAATCAACAACGATTGAGCCGTGTCTCTGGGTTTAATTCCGATATTAATTGCCTGACGTCTGGGTTCCCGACCAATGGAGTTGAACAGATAACATCAGTTCACATTGCTGGATTTCGTCTGGAAGAATCAGATAGACAAACAAGTGTCGGCCATACTATTGCAAAGACGAAGAGTGAAGATACAGATATTCAACATAGATCATCGGCAATACCAGGTGAAAACATCAATCAGTCAGATAAGTGTGAGGAGCAACATTCAGTGTCTTATAATCATTTAGGTGATGAGGTTGCTCAAACAGAGAAAGAAGTTTCTTCTGCGGACAACAATGCACAAAACCACAGTTCTGGATCTACCCTTTGGAGATGGATACCGATTGCAAAAAAGGATACGGCAGTGGCAAAATCTGAATCTAACTGTTCATTCACAGAATACTCTGATGCACCACCTTGTAAAATTTCTTACTTGGAACGCAGCGTTGAACCAAAAGTAGCTTCCTTTTCCGAAAAGCAGGATTCATCACAAAGTTTAAGCAGATCATGTATAGGTCGGATTTATAGTGAAGTTTCTTGTCTAGACGAAGGTGAGAATCAGAACTCGGGGAAGCAGGTTGCATGTACATTAACAGAGCACAGGGACAAGCATGTAGTAGCTAATCGCATAATTCATGAATGTCAGAATCAAGATACATTAGAAAATGATTCCTGCAGGATAGCTCAAGCTGTGAATAATGCCCATAGGGCACAACTAGCTTGTGAAGCTGTTCACGTGGCTGCAGGTGGTCCGATTGCGGAGTTTGAAAGATTGCTTCATTTTTGTAGTCCGGTTATTTGTCAATCACCCGATTCAGTCAGATGTTTGACCTGTTCACATGACCATGCTGATGGTGCCTCATTATGCAGACATGAGATCCCTGACCTATCTTTGCGATACCTGTGGCAGTGGTATGAGAAACCTGGGTGCTATGGTTTAGAGATAAGGGCTCAAGAATGTGAGTATTCAAAGAGACTAGGTGGTGTTGGTCAGTTTCCTTTTTGTGCATATTTTGTACCTTCTTTATCAGCAGTTCAGCTGTTTAAGAAACAGAAAAATCGATGTTCGAGTAGCAGTGACAAGTGTGGAATTGATGGCATTTCGGAACACTCATCTACTGCCAGTCGACATCCAATATTTTCTGTTCTCTTTCCTCAGCCTCGCTATCAGGATGCAAGCATTCAAACACCAAAAAATGTGTCTTCTATCAACGATGCATCTAATTCATGTACGGACTCAACATGCTCTGGTGATTTAGAGCTTCTTTTTGAATATTTTGAGTTTGAACAACCTCAACAAAGACAACCTCTATATGAGAAGATACAGGAGCTGGTTAGTGGTGTTATACCAATCCAGTCCAAAACTTTTGGGGACCCAACTAAACTGGATTCGGTAAACCTGCAAGATCTCGACCCTAGATCTTGGTACTCAGTTGCGTGGTATCCTATTTACCGTATACCCGATGGCAACCTTCGTGCATCTTTTTTGACTTACCATTCACTTGGACATTTGGTTCGTAGAAGTACAAATTCCGATTCCCCAACTGTAGGTTCTTCCATAGTATCTCCAGCTGTGGGTCTTCAAAGTTACAATGCCCAGGGTGAATGCTGGTTCCAGCCGAAGCAATCCGCACTGGCAACCGAAATTCTGGGCTCAAACCCTTCTTTACTTCTTAAAGAGCGATTACGAACTCTTGAGGAAACAGCATCCCTTATGGCAAGAGCTGTTGTCAAAAAAGGTAATCAAATCTGCACAAATAGACATCCCGACTACGAGTTTTTCCTCTCTAGGCGACGATATTGA 3624 0.4109 MEVSPIPRGRGRPRKTTGEMVKKYLEARKMPCALQAIGNDSLKVSKAGKDSISTIYQQQNKLTSFENCEESSVSRSNSSSRCAVISFLSFERDGTWRVIAVPVKVLNHINLASGINMDGLQLLFPPPLNRLKIDQCKGPRGPPPSYAYSAKPFTRKSITGSNVHRRCQNKIANKASKPNELPENSFSRSSSVCGSGLFPDSPAVVSSSDKLTSNTNADKSLKKNSRKKIRKKTRQSKKQPRDSGSTEPEVLNEESVSVSLTSETCSSNDVDKEVGLMSYTTEPESSSSDDRLIKNDCERNETIDRVNIMETPKSCNSFIGEAEMLKVTVPNIQNSAGEYATFESKNQFQDRGHDLEVLGGETMDIQQADLYCSNDIQDTLVLDSVSNGSKSDEVIKAGDMGKRSNKARRRTASSSGDGYFLDQNVTNGNRTNSEHNEGVRHGGQNCIGNDMGAKQKRTESKSSSFNNFGGVGILHGRTGKENSHSVWQKVQKKCSVECGDGDFKKENTTLSHFGSPVKGDPSVIRKSSSANENFLLKMEDTKQFKNKAGRKSNGKADQVSKKEHCSYSRKGSHFNRSMLNDNTKDSVQQNDISYQENNQQRLSRVSGFNSDINCLTSGFPTNGVEQITSVHIAGFRLEESDRQTSVGHTIAKTKSEDTDIQHRSSAIPGENINQSDKCEEQHSVSYNHLGDEVAQTEKEVSSADNNAQNHSSGSTLWRWIPIAKKDTAVAKSESNCSFTEYSDAPPCKISYLERSVEPKVASFSEKQDSSQSLSRSCIGRIYSEVSCLDEGENQNSGKQVACTLTEHRDKHVVANRIIHECQNQDTLENDSCRIAQAVNNAHRAQLACEAVHVAAGGPIAEFERLLHFCSPVICQSPDSVRCLTCSHDHADGASLCRHEIPDLSLRYLWQWYEKPGCYGLEIRAQECEYSKRLGGVGQFPFCAYFVPSLSAVQLFKKQKNRCSSSSDKCGIDGISEHSSTASRHPIFSVLFPQPRYQDASIQTPKNVSSINDASNSCTDSTCSGDLELLFEYFEFEQPQQRQPLYEKIQELVSGVIPIQSKTFGDPTKLDSVNLQDLDPRSWYSVAWYPIYRIPDGNLRASFLTYHSLGHLVRRSTNSDSPTVGSSIVSPAVGLQSYNAQGECWFQPKQSALATEILGSNPSLLLKERLRTLEETASLMARAVVKKGNQICTNRHPDYEFFLSRRRY 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0520 1207 MobiDBLite consensus disorder prediction 643 676 - -
Lal25g0520 1207 MobiDBLite consensus disorder prediction 416 433 - -
Lal25g0520 1207 MobiDBLite consensus disorder prediction 390 465 - -
Lal25g0520 1207 MobiDBLite consensus disorder prediction 203 291 - -
Lal25g0520 1207 PANTHER DUF789 FAMILY PROTEIN 30 1206 - -
Lal25g0520 1207 MobiDBLite consensus disorder prediction 223 237 - -
Lal25g0520 1207 MobiDBLite consensus disorder prediction 249 286 - -
Lal25g0520 1207 MobiDBLite consensus disorder prediction 203 219 - -
Lal25g0520 1207 MobiDBLite consensus disorder prediction 541 570 - -
Lal25g0520 1207 Pfam Protein of unknown function (DUF789) 860 1201 IPR008507 -
Lal25g0520 1207 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 30 1206 - -
Lal25g0520 1207 MobiDBLite consensus disorder prediction 541 583 - -
Lal25g0520 1207 Coils Coil 686 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0520 Lal-Chr25 3711888 3717632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0520 - - aprc:113867773 1402.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0520 25 3711888 3717632 Lal25g0520 25 3711888 3717632 ECH
Lal8g0509 8 3492333 3500162 Lal25g0520 25 3711888 3717632 LSH
Lal25g0520 25 3711888 3717632 Lal10g0907 10 16506457 16513595 LSH