Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0506 ATGTCGCCGTCAAATGGGGTTCAGAACAACGGTGGCGGCGGTAACGGCTTGAATTGTATTGAGCACCAAGTTTCAAAATTTGATACTCTTGCTGGTGTGGCTATTAAATATGGTGTTGAGACGGGTTCAGTGTCGTTGCCCTTGCTTTGTCATTTTAACGATGAGACTGATCCTGGAAATTTTAAAGTAGCTGACATCAAAAGGATGAATGGATTAGCCTCTGATCTTCAAATGTTTGCCCTGAAGACATTGAGAATTCCATTACCTGGACGACATCCACCATCTCCCATTCCAGTTCTGCCTAATGGACATGCCAAGCAAGGAGGTGATAGATTTGAAAGGAAATCGCCACCCACAGGTAAAGCTGCCATGAAGGAATCTCTTCAGTCCTCAAGAGTGAAAGCACTTGAAGAGGAGATTTCTCCGGCTATGACCATTTTACGGAAATACTATGGACTCGAATCTTCAAAGTCTAGAGATACATTTGAAGGAACAGAAATGGATGCTTATACATCTGCATGTTCAGATCATTCCAAGTCAACAAATCTAGTCTATGATCTACTGACTGGGAATGATGCAGTGCCTGAGTATCTATCTCCTTCAGAAATTGGTGATGCAAGAGGTGAGAAGTATGATGACAAATCTGTCCGCAGACGTCAGAAAGCTGATGCTGATAGTGGAGGTGGTACACCTGAAAGGATTTTGAAAGAGGGAAATAGTAGTGGTGGTTCGAATGGTTTTTCTTCAACCGGAAAACCATTATCCGGGAGGACAAAATCAGCAAGTCGAGCAGTGCTGTTTCCTGAATCAGAATCGGGATGGTTAGATTCTCTTGCAATGGGGTTGGGAGAATCTATATTGACAGACGGGTTTTCTGGAGTGCGGAAATCATCAAGCGCGTCAAGCCTAAGAGAGCAGGAGAAGAATAATTCAGCAGCAACAGTGTGGCCACCAAGATGGAGTTTGAAACCAGACTTGCAAGCAGCCATTGGGAAACCCATCTTTGATGGCTTACCTATCCCGATAACTGGCCGCAGGGGCAAAACTGCCCTTGATTAG 1059 0.4448 MSPSNGVQNNGGGGNGLNCIEHQVSKFDTLAGVAIKYGVETGSVSLPLLCHFNDETDPGNFKVADIKRMNGLASDLQMFALKTLRIPLPGRHPPSPIPVLPNGHAKQGGDRFERKSPPTGKAAMKESLQSSRVKALEEEISPAMTILRKYYGLESSKSRDTFEGTEMDAYTSACSDHSKSTNLVYDLLTGNDAVPEYLSPSEIGDARGEKYDDKSVRRRQKADADSGGGTPERILKEGNSSGGSNGFSSTGKPLSGRTKSASRAVLFPESESGWLDSLAMGLGESILTDGFSGVRKSSSASSLREQEKNNSAATVWPPRWSLKPDLQAAIGKPIFDGLPIPITGRRGKTALD 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0506 352 MobiDBLite consensus disorder prediction 92 130 - -
Lal8g0506 352 PANTHER LOC443603 PROTEIN-RELATED 62 352 IPR045030 -
Lal8g0506 352 PANTHER LOC443603 PROTEIN-RELATED 14 44 IPR045030 -
Lal8g0506 352 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 14 44 - -
Lal8g0506 352 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 62 352 - -
Lal8g0506 352 MobiDBLite consensus disorder prediction 196 258 - -
Lal8g0506 352 Gene3D LysM domain 16 93 IPR036779 -
Lal8g0506 352 MobiDBLite consensus disorder prediction 203 226 - -
Lal8g0506 352 MobiDBLite consensus disorder prediction 294 316 - -
Lal8g0506 352 MobiDBLite consensus disorder prediction 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0506 Lal-Chr8 3462959 3466229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0506 - - gmx:100786430 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0506 8 3462959 3466229 Lal8g0506 8 3462959 3466229 ECH
Lal8g0506 8 3462959 3466229 Lal25g0516 25 3680588 3683808 LSH
Lal8g0506 8 3462959 3466229 Lal10g0912 10 16542889 16548998 LSH