Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0453 ATGTCGTTCCAAGGCAGCAACAATGACCGCCCGGAAACTCCCTCGCCGGCAACCGGAGGAAACGGTGCTGTCGCAGCTGGAATCAAAGGAAACGGCACCGTTTTGTCGAGCCTTAGTCTGAGATTGAACCCTAACGAGGAGCATAAACCTGATGATTACGAAGATATGCAATTGGAATACAGCGCTGTAATCTTGAGCTCCCTTGAGAAGTACCTTCCTCCCACTATGCTCAATGATCATCGCGACCAAAAGGCCAAGTTCATGCAAGACATTTTGCTCAAGTATCTCCCAACTAAAGAACGTAACAGAGCTATAAAGCATAGAGAATACAGGCAGAAGATAATATCAAATTATCAGCCTCGAAATCGAGAGTTGTACACTTTGAATCCTACTGCAGTCTTTGTCCCATCATTTCTGAAAGCAATTAATGATAATACAGAACAAAGCTTTAGGAACATATTGTCCGAGCCCTCACCAGGCATTTTTGTATTTGAAATGCTTCAGAAAGACTTTTGTGAGTCATTGCTAGAGGAGATTGAAAATTTTGAGAAGTGGGTGACTGAAGCAAAATTCCGAATCATGCGCCCCAACACAATGAATAGATATGGTGCTGTACTTGAAGACTTTGGCTTTGAAACAATGCTCAACAACCTTATGGAAGGTTTTATTCGCCCTTTATCTAGAGTGTTCTTTGCTGAAGTTGGTGGAGCATCCCTGGATTCACATCATGGATTCGTTGTTGAATATGGTCAAGATAGAGATATTGACTTGGGTTTCCATGTGGATGACTCGGAAGTAACCTTGAACGTTTGCTTGGGTAAGCAATTTTCTGGAGGGGAATTGTTCTTTCGGGGCACACGATGTGAGAAACATGTAAATACAGATACTCAATCTGAGGAGATATTTGATTATTCCCATGCTCCTGGGAAAGCTGTTCTTCATTGTGGTCGTCATCGCCATGGTGCTAGAGCTACAACATCTGGGCATCGTGTCAACCTACTTCTGTGGTGCAGAAGTTCTGTCTTCAGAGAGATGAAAAGGTATCAAAAAGATTTCCCCAGCTGGTGTGATGAGTGCAGTCGTGAGAAAAAGGAAAGGCAGCGATCCTCACTTGCTACCAGAATGGTAAATCTTTATCTAATTTGGATGCTTCATTCAATACAATTCCAGATATTTTCAGGAGGGAAGGTGAATCCACTGCATAATCAGAAGTTAATTTCTGCTGAAGTCTGTGGTTGTCGTCATTGTCTTGGTGGCCTCTTTGATGGAGTAGTTGAGCCATGGTTCTATGTAAGGTTGTTTAGTGGTCATCATGGATTTTATTAG 1326 0.4261 MSFQGSNNDRPETPSPATGGNGAVAAGIKGNGTVLSSLSLRLNPNEEHKPDDYEDMQLEYSAVILSSLEKYLPPTMLNDHRDQKAKFMQDILLKYLPTKERNRAIKHREYRQKIISNYQPRNRELYTLNPTAVFVPSFLKAINDNTEQSFRNILSEPSPGIFVFEMLQKDFCESLLEEIENFEKWVTEAKFRIMRPNTMNRYGAVLEDFGFETMLNNLMEGFIRPLSRVFFAEVGGASLDSHHGFVVEYGQDRDIDLGFHVDDSEVTLNVCLGKQFSGGELFFRGTRCEKHVNTDTQSEEIFDYSHAPGKAVLHCGRHRHGARATTSGHRVNLLLWCRSSVFREMKRYQKDFPSWCDECSREKKERQRSSLATRMVNLYLIWMLHSIQFQIFSGGKVNPLHNQKLISAEVCGCRHCLGGLFDGVVEPWFYVRLFSGHHGFY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0453 441 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 240 339 IPR005123 -
Lal8g0453 441 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 374 - -
Lal8g0453 441 MobiDBLite consensus disorder prediction 1 15 - -
Lal8g0453 441 MobiDBLite consensus disorder prediction 1 26 - -
Lal8g0453 441 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 17 374 - -
Lal8g0453 441 Gene3D q2cbj1_9rhob like domain 157 339 - -
Lal8g0453 441 SMART p4hc 159 338 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0453 Lal-Chr8 3016238 3020800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0453 - - gmx:100816390 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0681 23 9477677 9489549 Lal8g0453 8 3016238 3020800 ECH
Lal8g0453 8 3016238 3020800 Lal8g0453 8 3016238 3020800 ECH
Lal8g0453 8 3016238 3020800 Lal10g0964 10 16939217 16945284 LSH
Lal23g0681 23 9477677 9489549 Lal8g0453 8 3016238 3020800 PCT
Lal8g0453 8 3016238 3020800 Lal23g0681 23 9477677 9489549 PCT