Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0430 ATGCCGTTGACTACTACCACTTCTAAACTATCAGAATTGCTTATCTTCAAGTCAAATTTATCATCACTCTCACTTTCCCCTTTTCCTCGCTCCTCCACTCTCTTCCTCTCTCACTCCAATTTCCCATTCCCCACTCTCATTTTCTCTTCTCTCAGAACTACCCAACATGACAATAACCATAACCATTCCTCCTCAAAACCCAACCTTTCTCCACCCTGGCTTACCAAAACCCCCTCTTCAGACAATGCTCCCAAAAGGGTCACCGAATCCATCACCAAAGACTCATTTTCTAATGCAACCGATAAAGGGCACTTTCAGAGTGGTGATAAAGGGCAAAACGCGGTTGAGAGAATTTTTCTTCGGTTAAGGAACTTGGGGTTAACTCCAGATGATGAAAAGGAAGCTAAAGCAGAAGTAACAGAAGATAAGGGTAATGATGTTGTTGCCGTGACAGGAGAGGAGAGTTTGGGTGATTTGCTTAGGAGAGAATGGGTTAGGCCAGATTCTATGTTGTTATTGGATGAGGGTAAGTTGAATGACGAAATGGTTTTGCCATGGGAAAGAGAAGCATATGAGACGGTGGGTAAAAAGGAGAATGAGAAGGGTGAGAAGGGAGAAAATGGATTGAGTAAAAGAAGAGCAAAGGCACCATCTTTGGCTGAATTAACACTTGAAGATGAATTATTGAGAAGGTTGAGGAGAGAGGGGATAACGATTAGAGAGAGGATTAATGTGGCTAAAGCTGGGCTCACACAAGATGTGATGGATAAGATTCATAAGACATGGAGGAGGGAGGAGCTGGTGAGGCTAAAATTTCACGAAGAACTCGCTAGGGATATGAAAACTGTTCATAAGATTGTTGAGCGTCGAACTGGAGGGTTAGTTACATGGAGCTCAGGAAGTGTTATGATGGTGTATCGTGGTATTAATTACCAAGGGCCTGCATCTGAGATTCAACTCAATCAAAGGGAAGGTGATGGCTTTTTCATACCAGATGTGTCATCAGGAAGCTTGTCAAGAACAAAAGATGGTAATGAAACATCAACTCTGGAGAAGACTGAGCCAGTTGTGAAGATTGAAGAAGAGTCTGAGAATATGACAGAGGAAGAAGCAGAATACAATGCATTACTTGATGGTTTAGGTCCTCGTTTTGTTGAATGGTGGGGTACAGGAATACTTCCTGTTGATGCTGATAAACTTCCTCCTAAAGTTCCTGGTTACAGAACACCTTTTAGGCTTCTTCCTGTTGGAATGCGTTCTAATCTAACAAATGCAGAGATGACCAATTTAAGGAACCTTGCCCGATCACTTCCTTGTCATTTTGCCTTAGGGAGAAATAGACATCACCAAGGTCTGGCATGTGCTATTGTTAAGCTTTGGGAGAAAAGTTTAGTTGCAAAGATTGCTGTCAAACGTGGTATCCAGAACACAAACAATAAACTAATGTCTGAGGAGCTCAAGGTGTTAACAGGAGGGACCTTGCTGTCAAGGAATAATTATTTTGTTGTTATATATCGGGGGAAGGACTTTGTTCCAACAAGTGTGGCATCATTTTTGGCTGAAAGAGAGGATTTGACAAAACAGGTACAGGATGTTGAAGAGAAGGTGCGGTTTGGAACTGTTGATGGAACTCCATCCGGGCAAGATGAAGCAACACCACATGCAGGATCTTTAGCAGAGTTCTATGAGGCTCAGGCACGCTGGGGAAGGGATATATCTGCTGAAGAACGTGAGAAGATGATGGAAGAAGCTGCCAAAGTCAAAAGTCTTAGGATTGTCAGACAGATTGAACATAAACTAGATCTTGCCCAGGGCAAAAAGCATAGAGCTGAAAAACTGATGTCTAAAATAGAAGCATCCATGATTCCAGCTGGTCCTGATCATGACCAGGAAACAATCACAGATGAAGAACGTGCTATGCTCCGCAGGGTTGGTTTAAGAATGAAGCCATACTTACCACTTGGTATACGTGGTGTGTTTGATGGTGTCATTGAGAATATGCATCTGCATTGGAAATACAGAGAGCTTGTAAAATTGATAACAAAGCAAAAGACTCTTGCTTTTGTTGAAGACACAGCAAGGTTACTGGAATATGAGAGTGGTGGAATACTAGTGGCAATAGAGAGAGTTCCCAAAGGATTTGCTCTTATTTACTATCGTGGAAAGAATTATAGGAGGCCCATTACTATAAGGCCTAGAAACCTTTTAACGAAGGCAAAGGCATTGAAGCGTTCAGTAGCCATGCAACGACATGAGGCTCTGAGTCAGCGTATTACTGAATTGGAGAAAACTATATATCAAATGAAAAGAGAACTTGGCATGTCTCAAGATTTGGAGCTTGAAGATAAGTGGAGCATAGAGGACCACGACCAAATAGACAACAACTCAGAATTCAATGAGAGCGGGGATGAAGATTCTGATAATGTTGATAATGGTCGTGGTTTTGATGATATGGAAGACAGCGATTGGGAAGATGATGAAGACTGA 2487 0.421 MPLTTTTSKLSELLIFKSNLSSLSLSPFPRSSTLFLSHSNFPFPTLIFSSLRTTQHDNNHNHSSSKPNLSPPWLTKTPSSDNAPKRVTESITKDSFSNATDKGHFQSGDKGQNAVERIFLRLRNLGLTPDDEKEAKAEVTEDKGNDVVAVTGEESLGDLLRREWVRPDSMLLLDEGKLNDEMVLPWEREAYETVGKKENEKGEKGENGLSKRRAKAPSLAELTLEDELLRRLRREGITIRERINVAKAGLTQDVMDKIHKTWRREELVRLKFHEELARDMKTVHKIVERRTGGLVTWSSGSVMMVYRGINYQGPASEIQLNQREGDGFFIPDVSSGSLSRTKDGNETSTLEKTEPVVKIEEESENMTEEEAEYNALLDGLGPRFVEWWGTGILPVDADKLPPKVPGYRTPFRLLPVGMRSNLTNAEMTNLRNLARSLPCHFALGRNRHHQGLACAIVKLWEKSLVAKIAVKRGIQNTNNKLMSEELKVLTGGTLLSRNNYFVVIYRGKDFVPTSVASFLAEREDLTKQVQDVEEKVRFGTVDGTPSGQDEATPHAGSLAEFYEAQARWGRDISAEEREKMMEEAAKVKSLRIVRQIEHKLDLAQGKKHRAEKLMSKIEASMIPAGPDHDQETITDEERAMLRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKYRELVKLITKQKTLAFVEDTARLLEYESGGILVAIERVPKGFALIYYRGKNYRRPITIRPRNLLTKAKALKRSVAMQRHEALSQRITELEKTIYQMKRELGMSQDLELEDKWSIEDHDQIDNNSEFNESGDEDSDNVDNGRGFDDMEDSDWEDDED 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0430 828 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 7 828 IPR045278 GO:0000375|GO:0003729
Lal8g0430 828 MobiDBLite consensus disorder prediction 789 828 - -
Lal8g0430 828 ProSiteProfiles CRM domain profile. 420 517 IPR001890 GO:0003723
Lal8g0430 828 Coils Coil 356 379 - -
Lal8g0430 828 ProSiteProfiles CRM domain profile. 222 318 IPR001890 GO:0003723
Lal8g0430 828 Coils Coil 744 771 - -
Lal8g0430 828 Coils Coil 593 613 - -
Lal8g0430 828 SUPERFAMILY YhbY-like 223 314 IPR035920 -
Lal8g0430 828 MobiDBLite consensus disorder prediction 195 214 - -
Lal8g0430 828 ProSiteProfiles CRM domain profile. 631 731 IPR001890 GO:0003723
Lal8g0430 828 MobiDBLite consensus disorder prediction 56 107 - -
Lal8g0430 828 SUPERFAMILY YhbY-like 421 514 IPR035920 -
Lal8g0430 828 MobiDBLite consensus disorder prediction 195 211 - -
Lal8g0430 828 SMART CRS1_YhbY_2 633 720 IPR001890 GO:0003723
Lal8g0430 828 SMART CRS1_YhbY_2 422 506 IPR001890 GO:0003723
Lal8g0430 828 SMART CRS1_YhbY_2 224 307 IPR001890 GO:0003723
Lal8g0430 828 Gene3D - 420 514 IPR035920 -
Lal8g0430 828 Gene3D - 632 731 IPR035920 -
Lal8g0430 828 Gene3D - 222 323 IPR035920 -
Lal8g0430 828 SUPERFAMILY YhbY-like 632 730 IPR035920 -
Lal8g0430 828 MobiDBLite consensus disorder prediction 56 110 - -
Lal8g0430 828 Pfam CRS1 / YhbY (CRM) domain 634 709 IPR001890 GO:0003723
Lal8g0430 828 Pfam CRS1 / YhbY (CRM) domain 422 506 IPR001890 GO:0003723
Lal8g0430 828 Pfam CRS1 / YhbY (CRM) domain 225 307 IPR001890 GO:0003723
Lal8g0430 828 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 7 828 - -
Lal8g0430 828 Coils Coil 515 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0430 Lal-Chr8 2883302 2896530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0430 - - lang:109347730 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0430 8 2883302 2896530 Lal8g0430 8 2883302 2896530 ECH
Lal8g0430 8 2883302 2896530 Lal25g0456 25 3132156 3138290 LSH
Lal16g1013 16 6732654 6739995 Lal8g0430 8 2883302 2896530 PCT
Lal8g0430 8 2883302 2896530 Lal16g1013 16 6732654 6739995 PCT