Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0262 ATGATGGATGGGAATTTAAGCAAAAACAGAAGCATAAGTAGTAATTTAAGCAGAAGTATAAGTAGGAGTTTAAGCAAATCAGGATGGAGAATGGAGGAAGTGTTTGCAAGTGGACGTTATTCAAGAAGAACTTCAACTGTTGATGAAGATGAAGAAGCTCTTAAATGGGCTGCTATAGAGAAATTGCCAACCTATGATAGGCTTAGAACAAGTATCTTTCAAACTTATGCTGAAGGTAATAATCATGCTGAGAAACCCAGAGAAGTTGATGTTAGAAAGTTGGATGGGAATGAAAGGCAACAGATTATTGATAAAATCTTCAAGGTTGCTGAAGAAGATAATGAGAAGTACTTGAAAAAATTCAGAAACAGAGTTGAAAGGGTTGGCATCAAACTTCCAACTGTAGAAGTAAGGTTCCATAATTTGACTGTTGAGGCAGATTCTTACATTGGTAGCAGAGCTCTACCAACTTTACCAAATGTTGCATTGAACATTATTGAATCAGCTATTGGCATATTTGGGATTAGTACTGCAAAGAGAACAAAACTCACAATTCTTAAGAATGCATCTGGCATTATTAAACCTTCAAGGATGGCCCTTTTGCTAGGTCCACCTTCCTCTGGGAAAACAACACTTCTGCTAGCATTGGCCGGGAAATTGGACCCTGATTTGAGGGTTAGCGGAGAAATAAGCTATAATGGGCACAAGCTTAATGAGTTTGTTCCTAGAAAAACTTCAGCTTATATTAGTCAAAATGATGTGCATCAAGGAGAAATGACAGTGAAAGAAACCCTTGATTTCTCAGCTAGATGCCAAGGGGTTGGGACAAGATATGACCTTTTAGCTGAGGTAGCTAGAAGAGAAAAGGAAGCAGGCATATTTCCAGAGGCAGAACTTGACCTCTTCATGAAGGCTACTGCAATGGAAGGAACAGAAAGCAGTCTCATGACTGACTACACTCTCAAAATATTGGGGCTGGATATTTGCAAAGATACTGTTGTGGGTGATGATATGAACAGAGGTGTATCTGGTGGTCAAAAGAAGCGTGTAACTACAGGTGAGATGATTGTTGGGCCCACAAAAACACTGTTTATGGATGAGATATCAACGGGTCTTGATAGCTCCACGACATTTCAAATAGTAAAATGCTTCCAACAAATTGTACACCTAACTGAAGCAACCATCTTTATGTCTCTACTACAACCTGCTCCTGAGACATTTGATCTCTTTGATGATATTATCTTAATATCTGAGGGCCAAATTGTTTATCAAGGCCCACGTGATCACATCCTTGAATTCTTTGAGTCTTTTGGGTTTAAATGCCCTGATAGAAAGGGTACAGCTGATTTCTTGCAAGAGGTTACTTCAAGGAAGGACCAAGAGCAATATTGGGCAGACAGAAACACACCATACCGTTATATAACAGTGAGTGAGTTTGCACAAAGGTTCAAGCAGTTCCATGTTGGAAGGCAACTTGAGAGTGAACTCTCTGTGTCATTTGACAAGACAAGGGGGCATAAAGCAGCTCTTGTTTTCAAGAAATACACAGGCTCCACAATGAAACTTTTCAAAGCATGTTGGGACAAGGAATGGCTTCTTATCAAGAGGAATGCTTTTGTCTATATATTCAAGACAGGTCAAATAGTAGTTATTGGTTTTATAGCAGCAACTGTATTCCTTAGGACTGAAATGAATACAAGGAATGAGAGTGATGCAGCACTTTATGTTGGTGCAATTTTGTTTACCATGATCATGAACATGTTTAATGGTATTTCTGAGCTGCCACTCACAATTGCAAGGCTTCCTGTGTTTTACAAACATAGAGACCATCTTTTTCACCCTCCATGGACCTACACACTCCCCAACTTCCTTCTAAGGTTGCCCATTTCTGTAATGGAGTCTATTGTTTGGACGGTTATTACATACTACTCAATTGGATTTGCACCTGCAGCCGCCACGTTCTTCAAGCACTTGTTAGTGGTGTTTCTTGTCCAACAAATGGCTGCTGGAATGTTTAAGCTAATTTCAGGATTCTGTAGGACAATGATTGTTGCCAACACTGGTGGAGCCCTCATGCTCATTCTTGTTTTCTTACTTGGAGGTTTCATCCTTCCAAAAGATGACATTCCAAATTACTGGATTTGGGGTTATTGGATCTCTCCACTGATGTATGCTTTCAATGCCTTTTCTGTAAATGAATTGTTTGCTCCAAGGTGGCAAAAACCATCTTCAGATGGTCAAACTACAATTGGTTTAGCTACATTAAATAACTTTGGTGCTCAAGCTGAAAAAAAATGGTACTGGATTGGTGTTGGAGCTCTCCTAGGTTTTGTGATTTTGTACAATGTTCTCTTCACCCTTTCACTTATGTACCTTAACCCTATTGGAAAGAAACAAGCAATTATATCTGAAGAAGAAGCAAGTGAAATGGAGGCTGAAGGAGACTCCAAGGAAAAACCTAGACTTTTAAGACCACAGTCCAACAAAGGACTACCACCTGGACCATTATCTTCTGCTGATGGAAACAATACAAGAGAAGTGGCAATGCAACGAATGAGCGGTAATCCCAGCGAAATAAGAAATGTTGATCCAACCATTGAGTTAGCCACAGGAGTTGCCCCTAAAAGAGGAATGGTTCTACCTTTTCAACCACTTGCTATGTCTTTTGATAGTGTCAATTACTATGTGGACATGCCTGCTGAAATGAAAGAACAAGGAGTGAGTGAGAATAGGCTACAATTGCTTAGGGAAGTAACTGGCGCCTTTAGGCCTGGAGTTCTAACTGCTCTAATGGGAGTTAGTGGAGCTGGAAAGACAACTTTAATGGATGTTTTAGCAGGAAGAAAGACAGGTGGCTACATTGAAGGAGAAGTTAGAATCTCCGGCTTCCCTAAGAACCAAGAAACCTTTGCTAGAATTTCAGGATATTGTGAACAAACTGATATCCATTCACCCCAAGTTACTGTCAAAGAATCTCTGATTTACTCAGCTTTCCTTAGGTTACCTAAAGAAGTCAGTAATGAGGAAAAGATGAAATTTGTGGAAGAAGTAATGGATTTAGTGGAGCTGAATAATCTAAAGGATGCAATAGTTGGACTTCCAGGTGTTACAGGGTTGTCAACTGAACAGCGAAAGAGGCTAACGATCGCTGTTGAGCTTGTTGCTAATCCTTCAATCATTTTCATGGATGAGCCAACTTCAGGTCTTGATGCAAGAGCAGCTGCCATTGTTATGAGGACTGTGAGAAACACTGTTGACACTGGAAGAACAGTTGTCTGTACAATTCATCAGCCTAGCATTGATATCTTTGAAGCCTTTGACGAGCTTTTGCTGATGAAGAGAGGAGGGCAAGTGATCTATTCAGGACCTTTAGGAAGGAATTCACACAAGATTGTAGAATATTTTGAGGCAATTCAAGGGGTCACAAAAATTAAAGATAAGTACAACCCAGCTACATGGATGTTAGAGGTAAGCTCCATAGCAGCTGAAGTTCGGCTTGGAATGGACTTTGCTGAATACTACAAAACATCAGCATTGGCTCAGAGAAACAAAGCTCTTGTAAAGGAGTTAAGTGTACCACCTCCTGGAGCAAAAGACTTGTATTTCCCTAGTCAGTATTCTCAACCAACTATGGGACAATTTAAATCATGCCTATGGAAGCAGTATCTTACTTATTGGAGGAGTCCAGATTATAACCTTGTCAGATATATGTTTACCTTGCTTGTTGCTCTAGTGGTGGGGACTGTATTTTGGAAAGTTGGCACAAAAAGGAATAGCTCTGGTAACTTGAGCACCATTATAGGAGCAATGTATGGCTCTCTCTTTTTTGTTGGTGTTAACAACTGCCAAACTGTTCAACCAGTTGTAGCCATTGAAAGAACAGTATTCTATAGAGAAAGGGCTGCTGGAATGTATTCTGCTTTACCTTATGCCATTGCACAGGTTATTATTGAAATACCATATTGCTTTGTTCAAACTATGCTTTTCTCATTCATAGTGTATGCTATGGTGAGCTTTGAGTGGCAAGTAGCGAAGGTCTTTTGGTTCTTATTTGTGAGCTTCTTTACCTTCCTGTACTTCACATACTATGGTATGATGACTGTTTCCATTACACCAAACCACCAAGTGGCATCAATCTTTGGAGCTGCATTCTATGGACTCTTCAATCTCTTCTCTGGTTTCTTTATTGCTAGACCAAAAATTCCTAAGTGGTGGGTATGGTATTACTGGATTTGCCCAATTGCATGGACAGTGTATGGATTAATCGTATCACAATATAGAGATGTAATGGATGAAATTGATGTACCTGGGTGGAATTATAAGCCTTCTATCAAAGATTTTATTGATGTGGAATATGGATTTAAATCAAACTTCATGGGCCCAGTTGCTGCAGTTTTGGTGGCTTTCCCTGTCTTCTTTGCCTTTGTATTTGCCACAGGCATCAAAGTACTCAACTTCCAAACAAGATAA 4470 0.3982 MMDGNLSKNRSISSNLSRSISRSLSKSGWRMEEVFASGRYSRRTSTVDEDEEALKWAAIEKLPTYDRLRTSIFQTYAEGNNHAEKPREVDVRKLDGNERQQIIDKIFKVAEEDNEKYLKKFRNRVERVGIKLPTVEVRFHNLTVEADSYIGSRALPTLPNVALNIIESAIGIFGISTAKRTKLTILKNASGIIKPSRMALLLGPPSSGKTTLLLALAGKLDPDLRVSGEISYNGHKLNEFVPRKTSAYISQNDVHQGEMTVKETLDFSARCQGVGTRYDLLAEVARREKEAGIFPEAELDLFMKATAMEGTESSLMTDYTLKILGLDICKDTVVGDDMNRGVSGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTFQIVKCFQQIVHLTEATIFMSLLQPAPETFDLFDDIILISEGQIVYQGPRDHILEFFESFGFKCPDRKGTADFLQEVTSRKDQEQYWADRNTPYRYITVSEFAQRFKQFHVGRQLESELSVSFDKTRGHKAALVFKKYTGSTMKLFKACWDKEWLLIKRNAFVYIFKTGQIVVIGFIAATVFLRTEMNTRNESDAALYVGAILFTMIMNMFNGISELPLTIARLPVFYKHRDHLFHPPWTYTLPNFLLRLPISVMESIVWTVITYYSIGFAPAAATFFKHLLVVFLVQQMAAGMFKLISGFCRTMIVANTGGALMLILVFLLGGFILPKDDIPNYWIWGYWISPLMYAFNAFSVNELFAPRWQKPSSDGQTTIGLATLNNFGAQAEKKWYWIGVGALLGFVILYNVLFTLSLMYLNPIGKKQAIISEEEASEMEAEGDSKEKPRLLRPQSNKGLPPGPLSSADGNNTREVAMQRMSGNPSEIRNVDPTIELATGVAPKRGMVLPFQPLAMSFDSVNYYVDMPAEMKEQGVSENRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGEVRISGFPKNQETFARISGYCEQTDIHSPQVTVKESLIYSAFLRLPKEVSNEEKMKFVEEVMDLVELNNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIVEYFEAIQGVTKIKDKYNPATWMLEVSSIAAEVRLGMDFAEYYKTSALAQRNKALVKELSVPPPGAKDLYFPSQYSQPTMGQFKSCLWKQYLTYWRSPDYNLVRYMFTLLVALVVGTVFWKVGTKRNSSGNLSTIIGAMYGSLFFVGVNNCQTVQPVVAIERTVFYRERAAGMYSALPYAIAQVIIEIPYCFVQTMLFSFIVYAMVSFEWQVAKVFWFLFVSFFTFLYFTYYGMMTVSITPNHQVASIFGAAFYGLFNLFSGFFIARPKIPKWWVWYYWICPIAWTVYGLIVSQYRDVMDEIDVPGWNYKPSIKDFIDVEYGFKSNFMGPVAAVLVAFPVFFAFVFATGIKVLNFQTR 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0262 1489 CDD ABCG_PDR_domain2 884 1122 IPR034003 -
Lal8g0262 1489 CDD ABCG_PDR_domain1 179 425 IPR034001 -
Lal8g0262 1489 Pfam ABC-2 type transporter 522 734 IPR013525 GO:0016020|GO:0140359
Lal8g0262 1489 Pfam ABC-2 type transporter 1213 1426 IPR013525 GO:0016020|GO:0140359
Lal8g0262 1489 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 20 1489 - -
Lal8g0262 1489 Pfam ABC-2 type transporter 1096 1157 IPR043926 GO:0140359
Lal8g0262 1489 Pfam ABC-2 type transporter 401 476 IPR043926 GO:0140359
Lal8g0262 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 908 1124 IPR027417 -
Lal8g0262 1489 MobiDBLite consensus disorder prediction 808 842 - -
Lal8g0262 1489 Pfam ABC transporter 915 1067 IPR003439 GO:0005524
Lal8g0262 1489 Pfam ABC transporter 186 368 IPR003439 GO:0005524
Lal8g0262 1489 Pfam ABC-transporter N-terminal 95 161 IPR029481 -
Lal8g0262 1489 Gene3D - 901 1137 IPR027417 -
Lal8g0262 1489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 443 IPR027417 -
Lal8g0262 1489 SMART AAA_5 195 420 IPR003593 -
Lal8g0262 1489 SMART AAA_5 924 1116 IPR003593 -
Lal8g0262 1489 Gene3D - 172 481 IPR027417 -
Lal8g0262 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 887 1140 IPR003439 GO:0005524
Lal8g0262 1489 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 1489 - -
Lal8g0262 1489 Pfam Plant PDR ABC transporter associated 739 802 IPR013581 -
Lal8g0262 1489 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 170 443 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0262 Lal-Chr8 1751941 1761654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0262 K08711 - gmx:100801386 2450.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0306 25 2090688 2101604 Lal8g0262 8 1751941 1761654 LSH
Lal10g1118 10 17997775 18007306 Lal8g0262 8 1751941 1761654 LSH
Lal8g0262 8 1751941 1761654 Lal20g1149 20 15924933 15937812 PCT
Lal20g1149 20 15924933 15937812 Lal8g0262 8 1751941 1761654 PCT