Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0259 ATGGCACCTTGTAGAGAAACTTTGCCTATTCCATTATCGAATAAGAGCAACAACAATGGCAACATGTCTAAGCCACCAAAGCTTCCATTTGAACACAATATTCAAAGAACAATCTCAGATATCTCTCTTGAGCTAAGCAAAGAAGGCATTGATTTGAGTACACTTCCACCAATAACTGAGGTTGAAGATGAAAAGTGTGAGTGTTGTGGCATGTGTGAGGAGTGCACACCCGAATACATTGAACATATACGAGACAAGTTCCTAGGTAAGTTTGTATGTGGCTTGTGTTCTGAGGCTGTGAAGGTAGAGTTGGAGAAATATGGTGGAAACAAGGAAGATGCATTAAGTGCACATATAAATGCATGTGTTAGGTTCAACAAATTTGGGAGGGTTTTCCCTGTTTTGTTCCAAGCTGAGGCTATGAAAGAGATTCTGAAAAAGAGCAAAATAGATGGGAGATCAAGAGCTAAGTCCTTTAACCCTAGGGAGAAAGGTGGAGAAAACAAAGCTGGGATTTCTAGGAGTTCAAGTTGCATTGCTGCAATTACAAGACAAATGGATAATCTCACAACAGCCAAATAA 582 0.3986 MAPCRETLPIPLSNKSNNNGNMSKPPKLPFEHNIQRTISDISLELSKEGIDLSTLPPITEVEDEKCECCGMCEECTPEYIEHIRDKFLGKFVCGLCSEAVKVELEKYGGNKEDALSAHINACVRFNKFGRVFPVLFQAEAMKEILKKSKIDGRSRAKSFNPREKGGENKAGISRSSSCIAAITRQMDNLTTAK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0259 193 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 57 86 IPR017896 -
Lal8g0259 193 MobiDBLite consensus disorder prediction 155 174 - -
Lal8g0259 193 MobiDBLite consensus disorder prediction 155 169 - -
Lal8g0259 193 Pfam Protein of unknown function (DUF1677) 61 147 IPR012876 -
Lal8g0259 193 PANTHER OS01G0745000 PROTEIN 15 190 IPR012876 -
Lal8g0259 193 MobiDBLite consensus disorder prediction 1 27 - -
Lal8g0259 193 MobiDBLite consensus disorder prediction 10 24 - -
Lal8g0259 193 PANTHER CASP-LIKE PROTEIN (DUF1677) 15 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0259 Lal-Chr8 1730674 1731255 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0259 - - gmx:100785884 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0259 8 1730674 1731255 Lal8g0259 8 1730674 1731255 ECH
Lal25g0305 25 2086256 2086843 Lal8g0259 8 1730674 1731255 LSH
Lal10g1120 10 18019733 18020305 Lal8g0259 8 1730674 1731255 LSH
Lal8g0259 8 1730674 1731255 Lal20g1152 20 15970888 15971463 PCT
Lal20g1152 20 15970888 15971463 Lal8g0259 8 1730674 1731255 PCT