Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1152 ATGGCACCTAATGGAGATTCTTTACCTAGATCTGATTTCTGCAAGAACAACAACATGTCCAAGCCAGCAAAACTCTCATCTGAGAACCTTCAAAGAACAATCTCAGATATCTCATTTGACCTAACCAACACCAAAGAAGTGATTGATGATTTGAAACTAGCACCAATATCTGAGGTTGAGGATGCAAAGTGTGAGTGTTGTGGCATGTGTGAAGAGTGCACACAAGAATACATCAACCTCATTTGTGATAAGTTCTTTGGGAAGTTTGTGTGTGGATTGTGTTCTGAAGCAGTGAAGGAAGAGTTGGTGAAAAATGGAGGAAAAAAAGAAGATGCTTTAAGTGCACACATAACTGCATGTGTTAGTTTCAACAAATATGGAAGAGCTTTCCCTGTTTTGTTTCAAGCTCAAGCAATGAAAGAGATTTTGAAAAAGAACACACAAAATGGTAGAATTAGGGCTAAGTCCTTTAGCCCTGGGGATAAAGAAGGGGTGAAGAAAGGATTGATTTCGCGTAGTTCAAGTTGCATTTCAGCGTTTACAAAGGAGTTGAATGATATTAAGATTGCTCATTAA 576 0.3837 MAPNGDSLPRSDFCKNNNMSKPAKLSSENLQRTISDISFDLTNTKEVIDDLKLAPISEVEDAKCECCGMCEECTQEYINLICDKFFGKFVCGLCSEAVKEELVKNGGKKEDALSAHITACVSFNKYGRAFPVLFQAQAMKEILKKNTQNGRIRAKSFSPGDKEGVKKGLISRSSSCISAFTKELNDIKIAH 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1152 191 PANTHER CASP-LIKE PROTEIN (DUF1677) 1 188 - -
Lal20g1152 191 PANTHER OS01G0745000 PROTEIN 1 188 IPR012876 -
Lal20g1152 191 Pfam Protein of unknown function (DUF1677) 59 145 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1152 Lal-Chr20 15970888 15971463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1152 - - gmx:100816162 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1152 20 15970888 15971463 Lal20g1152 20 15970888 15971463 ECH
Lal25g0305 25 2086256 2086843 Lal20g1152 20 15970888 15971463 PCT
Lal10g1120 10 18019733 18020305 Lal20g1152 20 15970888 15971463 PCT
Lal8g0259 8 1730674 1731255 Lal20g1152 20 15970888 15971463 PCT
Lal20g1152 20 15970888 15971463 Lal25g0305 25 2086256 2086843 PCT
Lal20g1152 20 15970888 15971463 Lal10g1120 10 18019733 18020305 PCT
Lal20g1152 20 15970888 15971463 Lal8g0259 8 1730674 1731255 PCT