Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0305 ATGGCACCCCATGGAGAATCTTTGCATACTTCATTCTCTAATAAGATCAATAACATATCCATTTCCATGTCCAAGCCTCCAAAACTTCCATCTGAACACAACAATATTCAAAGAACAATCTCAGACATATCTTTTAACCTAACCAAAGAAAACATTGACTTGAGTACAACAACACTTCTTCCACCAATAACTGAAGTTGAAGATGCAAAGTGTGAGTGTTGTGGCATGTGTGAAGAGTGCACACCACAATATATTAAACGTATACAAGACAAGTTCCTAGGAAAGTTTGTGTGTGGTTTGTGTTCTGAGGCAGTGAAAGAAGAGTTGGTGAAAAATGGTGGAGACAAGGAAGAAGCATTAAGTACACATATGAGTGCATGTGTTAGGTTCAACAAATTTGGTAGGGCTTTTCCTGTTTTGTTCCAAGCTGAGGCTATGAAAGAGATGCTGAAAAAGAGTAAAATGAATGGGAGAGGGTCTAAGTCCTTTAACCCTAGGGAAAAAGGAGATAAAGGTGGGATTTCTAGGAGTTCAAGTTGTATTGCTGCAATTACAAGAGATATGAATGATCTCAAAATAGCTAAATAA 588 0.3759 MAPHGESLHTSFSNKINNISISMSKPPKLPSEHNNIQRTISDISFNLTKENIDLSTTTLLPPITEVEDAKCECCGMCEECTPQYIKRIQDKFLGKFVCGLCSEAVKEELVKNGGDKEEALSTHMSACVRFNKFGRAFPVLFQAEAMKEMLKKSKMNGRGSKSFNPREKGDKGGISRSSSCIAAITRDMNDLKIAK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0305 195 PANTHER CASP-LIKE PROTEIN (DUF1677) 1 193 - -
Lal25g0305 195 PANTHER OS01G0745000 PROTEIN 1 193 IPR012876 -
Lal25g0305 195 MobiDBLite consensus disorder prediction 152 173 - -
Lal25g0305 195 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 62 91 IPR017896 -
Lal25g0305 195 MobiDBLite consensus disorder prediction 152 175 - -
Lal25g0305 195 Pfam Protein of unknown function (DUF1677) 66 152 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0305 Lal-Chr25 2086256 2086843 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0305 - - gmx:100783355 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0305 25 2086256 2086843 Lal25g0305 25 2086256 2086843 ECH
Lal25g0305 25 2086256 2086843 Lal10g1120 10 18019733 18020305 LSH
Lal25g0305 25 2086256 2086843 Lal8g0259 8 1730674 1731255 LSH
Lal25g0305 25 2086256 2086843 Lal20g1152 20 15970888 15971463 PCT
Lal20g1152 20 15970888 15971463 Lal25g0305 25 2086256 2086843 PCT