Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0143 ATGAGAACCTTTCTTCTTCTTTCTCTCACAACCCTTCTTCTCTTCTCTTCATTCTCTCTCATTTCCTCCACCGTCACCGACGACGACGACGAAGATCTCAGCTTCCTCGAAGATTCCGATGACACCATCTCCGACCACCACCATCACTATGACGACCCCGATCCCGAAGACTTCCAAGACCACGAATCAGATATCGGAGACTTAGATCACGACGAGTACAAGTTACCCGAGATCGACGATAAGGACGTCGTCGTTTTGAAGAAGAATAACTTCAGCGACTTCGTCAACAATAACCGTTTCGTTTTAGTTGAATTCTACGCTCCTTGGTGCGGTCACTGTCAGCAATTGGCTCCTGAATATGCAGAAGCTGCAACTCAATTGAAGGGCGAAAATGTCATTTTGGCAAAGGTCGATGCTACTGAAGAAACTGAATTGGGAGACCAGTATGAAATTGAGGGATTCCCTACTCTCTATTTCTTCGTTGATGGACTTCACAAACTTTACAATGGCCCCAGGACTAAGGATGCTATAGTGAGTTGGATTAAGAAGAAGTCAGGACCTGGTGTTTACAACATAACTAGTTTGGATGTTGCTGAACGCATTCTCACATCTGAATCCAAAATCGTCTTGGCCTTTATCAACTCTTTAGTTGGCCCTGAGAGTGATGAGCTAGCTGCCGCTTCAAGACTTGAAGATGATGTCAATTTTTATCAAACTGTGAATCCTGATGTGGCGAAGCTTTTCCATATTGACCCCAATGTTAAACGCCCAGCTCTGGTCCTGATAAAAAAAGAGGATGAAAAACTCAACCATTTTGATGGCCAATTTGCAAAGTCTGAAATAGAAAACTTTGTGACAACCAACAAGCTTCCTTTGGTAACAGTTTTTACAATGGAAGGTGCTCCAGAAATATTCGAAAACCCAACCAAGAACCAGTTGTTGCTCTTTGCAACTTCAAATGATTCAGAGAAGTTGATCCCGGTATTTCAAGAAGCAGCAAAATCTTTCAAGGGGAAGCTGATCTTTGTATACGTGGAATCGGACAATGAAGAAGTTGGAAAGCCCGTTTCGGAGTACTTTGGTGTCAGTGGGGATGCTCCAAAAGTACTTGCATACACCGGAAATGAAGATGGAAACAAATTTGTTCTTGATGGCGAGGTGACTTTTGACAACATAAAGGTATTTGGGGAAAATTTCCTTGAAGGCAAGCTAAAGCCTTACTTGAAGTCAGATCCAGTTCCTGAAAGTAATGATGGTGATGTGAAAATAGTAGTTGGGAGTAACTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTCGAGATTTACGCTCCCTGGTGTGGACATTGCCAAGCACTGGAACCAATATACGACAAGCTTGCAAAACATCTACGCAGTGTTGAATCTATTGTAATAGCCAAAATGGATGGAACAACAAACGAACATCCAAGGGCAAAGGGCGATGGATTCCCCACTCTTCTATTCTTCCCAGCAGGACACAGGAATTTGGACCCTATTACTGTTGATACAGATCGTACAGTGGTAGCCCTTTATAAGTTCCTGAAGAAAAATGCATCAATCCCATTCAAGCTGGAGAAACCAACCTCAACCTCTAAACCCTCAAGTTCTGATGCCAAGGAGAGTGCTGATTCTAAGGAGAGCCAGAGTAGCAGTGAGGACGTGAAGGATGAATTGTGA 1704 0.4313 MRTFLLLSLTTLLLFSSFSLISSTVTDDDDEDLSFLEDSDDTISDHHHHYDDPDPEDFQDHESDIGDLDHDEYKLPEIDDKDVVVLKKNNFSDFVNNNRFVLVEFYAPWCGHCQQLAPEYAEAATQLKGENVILAKVDATEETELGDQYEIEGFPTLYFFVDGLHKLYNGPRTKDAIVSWIKKKSGPGVYNITSLDVAERILTSESKIVLAFINSLVGPESDELAAASRLEDDVNFYQTVNPDVAKLFHIDPNVKRPALVLIKKEDEKLNHFDGQFAKSEIENFVTTNKLPLVTVFTMEGAPEIFENPTKNQLLLFATSNDSEKLIPVFQEAAKSFKGKLIFVYVESDNEEVGKPVSEYFGVSGDAPKVLAYTGNEDGNKFVLDGEVTFDNIKVFGENFLEGKLKPYLKSDPVPESNDGDVKIVVGSNFDEIVLDESKDVLLEIYAPWCGHCQALEPIYDKLAKHLRSVESIVIAKMDGTTNEHPRAKGDGFPTLLFFPAGHRNLDPITVDTDRTVVALYKFLKKNASIPFKLEKPTSTSKPSSSDAKESADSKESQSSSEDVKDEL 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0143 567 PRINTS Thioredoxin family signature 101 109 - -
Lal8g0143 567 PRINTS Thioredoxin family signature 109 118 - -
Lal8g0143 567 PRINTS Thioredoxin family signature 150 161 - -
Lal8g0143 567 SUPERFAMILY Thioredoxin-like 417 528 IPR036249 -
Lal8g0143 567 Pfam Thioredoxin-like domain 225 395 - -
Lal8g0143 567 CDD PDI_b'_family 310 400 - -
Lal8g0143 567 CDD PDI_b_family 189 288 - -
Lal8g0143 567 Gene3D Glutaredoxin 290 414 - -
Lal8g0143 567 ProSiteProfiles Thioredoxin domain profile. 63 186 IPR013766 -
Lal8g0143 567 TIGRFAM pdi_dom: protein disulfide-isomerase domain 86 184 IPR005788 GO:0003756
Lal8g0143 567 TIGRFAM ER_PDI_fam: protein disulfide isomerase 81 567 IPR005792 GO:0003756
Lal8g0143 567 Gene3D Glutaredoxin 415 529 - -
Lal8g0143 567 ProSiteProfiles Thioredoxin domain profile. 399 528 IPR013766 -
Lal8g0143 567 PANTHER PROTEIN DISULFIDE ISOMERASE 4 547 - -
Lal8g0143 567 MobiDBLite consensus disorder prediction 533 567 - -
Lal8g0143 567 SUPERFAMILY Thioredoxin-like 287 418 IPR036249 -
Lal8g0143 567 SUPERFAMILY Thioredoxin-like 192 299 IPR036249 -
Lal8g0143 567 SUPERFAMILY Thioredoxin-like 76 186 IPR036249 -
Lal8g0143 567 ProSitePatterns Thioredoxin family active site. 441 459 IPR017937 -
Lal8g0143 567 Gene3D Glutaredoxin 71 185 - -
Lal8g0143 567 ProSitePatterns Thioredoxin family active site. 102 120 IPR017937 -
Lal8g0143 567 CDD PDI_a_PDI_a'_C 421 523 - -
Lal8g0143 567 Pfam Thioredoxin 421 522 IPR013766 -
Lal8g0143 567 Pfam Thioredoxin 83 183 IPR013766 -
Lal8g0143 567 CDD PDI_a_family 84 181 - -
Lal8g0143 567 PANTHER PROTEIN DISULFIDE-ISOMERASE 4 547 - -
Lal8g0143 567 MobiDBLite consensus disorder prediction 547 567 - -
Lal8g0143 567 MobiDBLite consensus disorder prediction 44 66 - -
Lal8g0143 567 Gene3D Glutaredoxin 186 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0143 Lal-Chr8 974796 979032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0143 K09580 - gmx:100170706 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0143 8 974796 979032 Lal8g0143 8 974796 979032 ECH
Lal25g0182 25 1177623 1181431 Lal8g0143 8 974796 979032 LSH
Lal8g0143 8 974796 979032 Lal2g0290 2 1685742 1691403 PCT
Lal2g0290 2 1685742 1691403 Lal8g0143 8 974796 979032 PCT