Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0290 ATGCAAAGTCATAAGCGACACGTCGTTTTCTTCTGCCTCACCACTCTTCTCTTCATCTCCTCCTTCTCTCTCTCTTTCTCCAAAACAACCCTCCAATACGACAACGACGATGACGAAGATCTCAGTTTCCTCGACGAACCCGATGACGTCACCACCTCCCACTTCAACCACCCAGATCTCGACCACTTCGACGATGACGATGAAGAAGGAGACGACGCCGACGAAGATTTTGACGATTTCTCAGCCTTCGACCATTCCACAAGCCATGACGAAGAACAACCTATCTTCGACGACAAACACGTCGTCGTATTGATAGAGCGCAATTTCACCACTATCGTTGAAAATAACCGCTTCGTCTTGGTCGAATTCTACGCTCCATGGTGCGGCCATTGCAAATCCCTCGCGCCGGAGTACGCTGCCGCTGCAACCGAGTTAAAATCCGACGACGTCGTTTTGGCCAAGGTAGATGCCACGGAGGAGCAGGAATTGGCACATGAGTATGATGTTAAGGGTTTCCCCACTCTGTTCTTCTTCATCGATGGAGTTCACAAGCCTTACACTGGTGGCAGAACCAAAGATGCAATAGTGAGCTGGATTAGGAAGAAGATAGGACCTGGTGTAGTCAACATAACTACGTTGGACGATGCTGAGAGCGTCTTGACCTCTGAAAACAAACTTGTTTTGGGCTTCCTCGATTCTCTAGTGGGTGCTGATAGTGAGGAGCTAGCTAATGCATCAAAACTTGAGGATGATGTCAATTTTTATCAAACAGTGAACCCTGATGTGGCAAAACTTTTCCATATTGACCCAAATTCCAAACGCCCTGCTTTGGTCTTGCTCAAGAAAGAGGAGGACAAGATCAACCATTTTGATGGTCGATATGTAAAATCTGAAATAGCAGGCTTTGTATCTTCCAACAAGCTTCCTTTGGTTACAACTTTTACAAGAGAGAGTGCCCCATCAATCTTTGAAAGTCAAATCAAGAAACAATTGTTGCTGTTTGTGACTAAAAATGATTCAGAGAAGTTTGTTCCAATATTTCAAGAAGTAGCAAAAGTTTTCAAGGGGAAGCTGATCTTTGTTCATGTGGAAATGGATAATGAAGATGTTGGAAAGCCAGTTGCAGATTATTTTGGTATCAGTGGGAGTGGTCCAAAGGTACTTGCATTCACAGGAAATGATGATGGAAGAAAATTTGTGTTTGATGAAGAGGTTTCTGTTGTCAAACTTAAGCCTGCAACAATGACACGAGATAATCTTTACTGGCTGAGTCACGACCAGGTCGCTCTCTTTAAGACGTTTCGTGGTACTGCCTCAAGGTGCAAGCAGACTATCAACCACGCCGTCCCCAGGATAAAACAGCTCAGCTCTCTGTTATACGATATCTTACTGCACTGTAAGAATCGCTCTCGAATACACCCAAAATATGGCTACCAGTGCCAATTCAGAAATACCCACAATATTGGAATATCTTATTCCAACTCTAGTGCCACGGAAAGAAAGGGAGAGAAGGAGGCCGGAAATGCGTCGGCAGAAAATATTGAGGGAGAAAGAAAAGAGCAAGTAAATTCGTACTTGCTCTTGGCATTTGGGGAAGATTTCCTTGAAGACAAGCTAAAACCTTTCCTGAAGTCAGATCCAGTTCCTGAAAGCAATGATGGTGATGTGAAAATTGTTGTTGGGGATAACTTTGATCAAATTGTCTTGGATGAGTCGAAGGACGTCCTGCTTGAGATTTATGCTCCGTGGTGTGGCCACTGTGAAGCTCTGGAACCAACATACAACAAGCTTGCAAAACATCTCCGTGGCATTGAGTCTATTGTAATAGCCAAGATGGACGGAACAACAAATGAGCATCCCAGGGCAAAGGCTGATGGATTCCCCACTCTTCTATTCTTCCCAGCAGGAAAGAAGAGTTCTGACCCTATTACTGTTGATGCGGATCGTACAGTGGTAGCCTTTTATAAGTTTCTCAAGAAGCATGCATCAATCCCGTTCAAGCTTGAGAAACCAACATCAACTTCTAAGTTTGAGAGTTCTGATGTGAAGGAGAGTCAGAGTAGCAGTACCGACCTGAAGGATGAATTATGA 2091 0.4433 MQSHKRHVVFFCLTTLLFISSFSLSFSKTTLQYDNDDDEDLSFLDEPDDVTTSHFNHPDLDHFDDDDEEGDDADEDFDDFSAFDHSTSHDEEQPIFDDKHVVVLIERNFTTIVENNRFVLVEFYAPWCGHCKSLAPEYAAAATELKSDDVVLAKVDATEEQELAHEYDVKGFPTLFFFIDGVHKPYTGGRTKDAIVSWIRKKIGPGVVNITTLDDAESVLTSENKLVLGFLDSLVGADSEELANASKLEDDVNFYQTVNPDVAKLFHIDPNSKRPALVLLKKEEDKINHFDGRYVKSEIAGFVSSNKLPLVTTFTRESAPSIFESQIKKQLLLFVTKNDSEKFVPIFQEVAKVFKGKLIFVHVEMDNEDVGKPVADYFGISGSGPKVLAFTGNDDGRKFVFDEEVSVVKLKPATMTRDNLYWLSHDQVALFKTFRGTASRCKQTINHAVPRIKQLSSLLYDILLHCKNRSRIHPKYGYQCQFRNTHNIGISYSNSSATERKGEKEAGNASAENIEGERKEQVNSYLLLAFGEDFLEDKLKPFLKSDPVPESNDGDVKIVVGDNFDQIVLDESKDVLLEIYAPWCGHCEALEPTYNKLAKHLRGIESIVIAKMDGTTNEHPRAKADGFPTLLFFPAGKKSSDPITVDADRTVVAFYKFLKKHASIPFKLEKPTSTSKFESSDVKESQSSSTDLKDEL 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0290 696 SUPERFAMILY Thioredoxin-like 207 318 IPR036249 -
Lal2g0290 696 PRINTS Thioredoxin family signature 119 127 - -
Lal2g0290 696 PRINTS Thioredoxin family signature 127 136 - -
Lal2g0290 696 PRINTS Thioredoxin family signature 168 179 - -
Lal2g0290 696 Gene3D Glutaredoxin 303 550 - -
Lal2g0290 696 MobiDBLite consensus disorder prediction 54 76 - -
Lal2g0290 696 PANTHER PROTEIN DISULFIDE-ISOMERASE 4 411 - -
Lal2g0290 696 PANTHER PROTEIN DISULFIDE-ISOMERASE 527 686 - -
Lal2g0290 696 ProSiteProfiles Thioredoxin domain profile. 71 204 IPR013766 -
Lal2g0290 696 SUPERFAMILY Thioredoxin-like 94 204 IPR036249 -
Lal2g0290 696 TIGRFAM pdi_dom: protein disulfide-isomerase domain 105 202 IPR005788 GO:0003756
Lal2g0290 696 CDD PDI_a_PDI_a'_C 556 658 - -
Lal2g0290 696 ProSitePatterns Thioredoxin family active site. 120 138 IPR017937 -
Lal2g0290 696 CDD PDI_a_family 102 199 - -
Lal2g0290 696 CDD PDI_b'_family 318 404 - -
Lal2g0290 696 MobiDBLite consensus disorder prediction 496 515 - -
Lal2g0290 696 ProSiteProfiles Thioredoxin domain profile. 542 663 IPR013766 -
Lal2g0290 696 MobiDBLite consensus disorder prediction 672 686 - -
Lal2g0290 696 Gene3D Glutaredoxin 551 664 - -
Lal2g0290 696 MobiDBLite consensus disorder prediction 672 696 - -
Lal2g0290 696 Gene3D Glutaredoxin 203 302 - -
Lal2g0290 696 Gene3D Glutaredoxin 92 202 - -
Lal2g0290 696 PANTHER PROTEIN DISULFIDE ISOMERASE 4 411 - -
Lal2g0290 696 PANTHER PROTEIN DISULFIDE ISOMERASE 527 686 - -
Lal2g0290 696 Pfam Thioredoxin 101 201 IPR013766 -
Lal2g0290 696 Pfam Thioredoxin 556 641 IPR013766 -
Lal2g0290 696 CDD PDI_b_family 207 306 - -
Lal2g0290 696 MobiDBLite consensus disorder prediction 498 515 - -
Lal2g0290 696 SUPERFAMILY Thioredoxin-like 306 553 IPR036249 -
Lal2g0290 696 Pfam Thioredoxin-like domain 243 411 - -
Lal2g0290 696 SUPERFAMILY Thioredoxin-like 552 663 IPR036249 -
Lal2g0290 696 MobiDBLite consensus disorder prediction 62 76 - -
Lal2g0290 696 ProSitePatterns Thioredoxin family active site. 576 594 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0290 Lal-Chr2 1685742 1691403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0290 K09580 - gmx:100790223 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0290 2 1685742 1691403 Lal2g0290 2 1685742 1691403 ECH
Lal25g0182 25 1177623 1181431 Lal2g0290 2 1685742 1691403 PCT
Lal8g0143 8 974796 979032 Lal2g0290 2 1685742 1691403 PCT
Lal2g0290 2 1685742 1691403 Lal25g0182 25 1177623 1181431 PCT
Lal2g0290 2 1685742 1691403 Lal8g0143 8 974796 979032 PCT