Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1396 ATGGTTGGTGGTGACAACACTAAGAAGTTGAAAGTTGAAGAGAATTCTGAGGATATTGATCCACAACTCCTCCTCTCCATCCAGAAGCTTCAGGAGATCCAAGACAACCTCGAAAAGATCAATGAAGAGGCAAGTGATAAAGTGGTGGAAATAGAACAGAAGTACAATGAGATAAGGAAGCCTGTTTACGATAATCGTAACGAAATTATCAAATCTATTCCTGATTTCTGGTTAACTGCTTTTTTGAGTCACCCTGCACTCGGCGAGCTTCTCAATGACGAAGATCAAAAGATATTTAAGTATTTGGATTCTCTTGAGGTTGAAGATCATAAAGATGTCAAATCGGGATACACAATCACCCTTAATTTCAAGCCAAATCCCTATTTTGAGGATACTAAGCTTACAAAAACTTATACATTCCATGATGAAGGAGCAACAAAGATTACTGCTACCCCCATAAAATGGAAAGAGGGCAAGGGCATACCCAATGGAGTAGATCATGAGAAGAAAGGGAACAAGCGAGCATTTGTTGATATCAGGCCCATTTCTTGTTATTCTAGACCTAATCCTGGAAAACTTTCCTATCGCTGTTCTTGCATAGTTGCATATGTACCAAAGAGTATTAGCTATGAGCTACAGTCCTCCCTCTATGTCCACCATGAGCCCTGTGTCTTATGTCTTCCATCAAACAGTTTCTTTAGTTGGTTTTCTGATTGTGAAGAGAAGGATGATGATATGGATGACATTCTCGATGAGGTTGCAGAATTAATAAAGGATGATTTATGGCCAAATCCACTTACATATTTCAACAATGAGGTCCCTGATGATATAGAGACTATTGGTGGACCTTATGAGGAAAATGATGATGATGAGGATGACTCTGAAGATGATGATGATGACGAGGAGGAGGAGTAG 915 0.3945 MVGGDNTKKLKVEENSEDIDPQLLLSIQKLQEIQDNLEKINEEASDKVVEIEQKYNEIRKPVYDNRNEIIKSIPDFWLTAFLSHPALGELLNDEDQKIFKYLDSLEVEDHKDVKSGYTITLNFKPNPYFEDTKLTKTYTFHDEGATKITATPIKWKEGKGIPNGVDHEKKGNKRAFVDIRPISCYSRPNPGKLSYRCSCIVAYVPKSISYELQSSLYVHHEPCVLCLPSNSFFSWFSDCEEKDDDMDDILDEVAELIKDDLWPNPLTYFNNEVPDDIETIGGPYEENDDDEDDSEDDDDDEEEE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1396 304 Gene3D - 4 73 - -
Lal7g1396 304 Coils Coil 23 54 - -
Lal7g1396 304 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 229 302 IPR002164 GO:0005634|GO:0006334
Lal7g1396 304 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 11 185 IPR002164 GO:0005634|GO:0006334
Lal7g1396 304 SUPERFAMILY NAP-like 13 270 IPR037231 -
Lal7g1396 304 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 11 185 - -
Lal7g1396 304 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 229 302 - -
Lal7g1396 304 Coils Coil 239 259 - -
Lal7g1396 304 Pfam Nucleosome assembly protein (NAP) 71 271 IPR002164 GO:0005634|GO:0006334
Lal7g1396 304 MobiDBLite consensus disorder prediction 279 304 - -
Lal7g1396 304 MobiDBLite consensus disorder prediction 269 304 - -
Lal7g1396 304 Gene3D Nucleosome assembly protein 74 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1396 Lal-Chr7 18935066 18938563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1396 K11290 - gmx:100808081 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1396 7 18935066 18938563 Lal7g1396 7 18935066 18938563 ECH
Lal14g1913 14 18441056 18447619 Lal7g1396 7 18935066 18938563 LSH
Lal17g1015 17 8367853 8374066 Lal7g1396 7 18935066 18938563 PCT
Lal21g0803 21 7051024 7062466 Lal7g1396 7 18935066 18938563 PCT