Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0803 ATGGTTGCTGATAAGAGCAAGAAGCTTAAGGTTTCAGAGAAGGAAGAAACGGAAATCGATGGAGAACTCGTCCTCTCCATCGAGAAGTTGCAGGAGATGCAAGACGAGCTCGAAAAGGTCAATGAGGAGGCCAGTGACAAAGTCCTGGAAATAGAGCAGAAGTACAATGAGATACGGAAGCCGATCTATGATAAGCGTAATGAGATTATTAAATCTATTCCTGACTTCTGGTTAACTGCTTTTCTAAGCCATCCTGCTCTTGGTGATCTCCTGAATGGCGAAGATCAAAAGATATTTAAGTATTTGAGTTCTCTTGAGGTTGAAGATTCTAAGGATGTCAAATCCGGCTATTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGGATACAAAGCTTGTAAAGACTTTTACCTTCCTTGAAGAAGGAACCACAAAGGTTACGGCAACACCCATAAAATGGAAAGAGGGCAAAGACATAACGAATGGAGTCAGTCATGAGAAGAAGGGGAGCAAGCGGGCTCCTATTGATATCAGCTTCTTTAGTTGGTTTTGTGACACTGAGCAGAAAGATGATCTGGATGACATTCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCACTTACTTATTTCAACAATGAGGAGCCTGACGAAGAGGATGGTGACGAGGACGAAGCTGCTGATGAGGATAAGGATGAAGATGACTCTGAAGATGATGATGCCCAAGAGGATGAGGAGGATGAGGATGGTGGCATTTGA 777 0.4221 MVADKSKKLKVSEKEETEIDGELVLSIEKLQEMQDELEKVNEEASDKVLEIEQKYNEIRKPIYDKRNEIIKSIPDFWLTAFLSHPALGDLLNGEDQKIFKYLSSLEVEDSKDVKSGYSITFNFNPNPYFEDTKLVKTFTFLEEGTTKVTATPIKWKEGKDITNGVSHEKKGSKRAPIDISFFSWFCDTEQKDDLDDIHDEVAELIKDDLWPNPLTYFNNEEPDEEDGDEDEAADEDKDEDDSEDDDAQEDEEDEDGGI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0803 258 Gene3D - 1 73 - -
Lal21g0803 258 Coils Coil 23 57 - -
Lal21g0803 258 Pfam Nucleosome assembly protein (NAP) 71 219 IPR002164 GO:0005634|GO:0006334
Lal21g0803 258 Pfam Nucleosome assembly protein (NAP) 27 71 IPR002164 GO:0005634|GO:0006334
Lal21g0803 258 MobiDBLite consensus disorder prediction 219 258 - -
Lal21g0803 258 SUPERFAMILY NAP-like 17 218 IPR037231 -
Lal21g0803 258 MobiDBLite consensus disorder prediction 210 258 - -
Lal21g0803 258 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 248 - -
Lal21g0803 258 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 248 IPR002164 GO:0005634|GO:0006334
Lal21g0803 258 Gene3D Nucleosome assembly protein 74 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0803 Lal-Chr21 7051024 7062466 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0803 K11290 - gmx:100808081 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0803 21 7051024 7062466 Lal21g0803 21 7051024 7062466 ECH
Lal17g1015 17 8367853 8374066 Lal21g0803 21 7051024 7062466 LSH
Lal21g0803 21 7051024 7062466 Lal14g1913 14 18441056 18447619 PCT
Lal21g0803 21 7051024 7062466 Lal7g1396 7 18935066 18938563 PCT