Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g1015 ATGGATTTTTGTGAAACTACGATTCTACCCCTTCACTGGACAGATTTGAATCATTTCGTGCACTCGCATGTTGTGTCTCATATAAATCCCAAAACCCTAACCTCTTTCATTCTCCATTTTCTCTCACTAGTGTCTCTCATTCATCACTCTGCTTCTCTCACTCAAAAACGTAACAGAGAACGCGCGAAAATGGTGTCTGACAAAAGTAAGAAGCTTAAGGTTTCGGAGAAGGAAGAAACTGAATTCGATGGAGAACTTCTCGTATCTATCGAGAAGTTGCAAGAGATGCAAGACGAGCTCGAAAAGGTGAATGAGGAGGCCAGTGATAAAGTCCTGGAAATAGAGCAGAAGTACAATGAGATACGGAAGCCGATCTATGATAAGCGGAATGAGATTATCAAATCTATTCCTGACTTCTGGTTAACTGCTTTTTTGAGTCATCCTGCACTTGGTGATCTTCTGAATGAGGAAGATCAAAAGATATTTAAGTATTTGAGTTCTCTTGAGGTTGAAGATTCTAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGGATAAACAGCTTGTAAAGACTTTTACCTTCCTTGAAGAAGGAACCACAAAGGTTACTGCATCACCTATAAAATGGAAAGAGGGCCAAGGCATACCCAATGGAGTCACTCATGAGAAGAAAGGGAACAAGCGGGCTCCTACTGACATCAGTTTCTTTAGTTGGTTTATTGACACTGAGCAGAAAGATGATATGGATGATATTCATGATGAGGTTGCAGAATTAATCAAGGATGACTTATGGCCAAACCCGCTTACATATTTCAACAATGAGGAGCTTGATGAAGAGGATGGTGACGAGGACGAAGCTGATGATGAGGATAAGGATGAAGATGACTCTGACGATGATGATCAAGAGGATGATGATGGCGGCGAGGAGGATGGTGGCAATTGA 969 0.4097 MDFCETTILPLHWTDLNHFVHSHVVSHINPKTLTSFILHFLSLVSLIHHSASLTQKRNRERAKMVSDKSKKLKVSEKEETEFDGELLVSIEKLQEMQDELEKVNEEASDKVLEIEQKYNEIRKPIYDKRNEIIKSIPDFWLTAFLSHPALGDLLNEEDQKIFKYLSSLEVEDSKDVKSGYSITFNFNPNPYFEDKQLVKTFTFLEEGTTKVTASPIKWKEGQGIPNGVTHEKKGNKRAPTDISFFSWFIDTEQKDDMDDIHDEVAELIKDDLWPNPLTYFNNEELDEEDGDEDEADDEDKDEDDSDDDDQEDDDGGEEDGGN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g1015 322 SUPERFAMILY NAP-like 79 281 IPR037231 -
Lal17g1015 322 Gene3D - 60 136 - -
Lal17g1015 322 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 65 313 IPR002164 GO:0005634|GO:0006334
Lal17g1015 322 MobiDBLite consensus disorder prediction 282 322 - -
Lal17g1015 322 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 65 313 - -
Lal17g1015 322 Gene3D Nucleosome assembly protein 137 284 - -
Lal17g1015 322 Pfam Nucleosome assembly protein (NAP) 90 134 IPR002164 GO:0005634|GO:0006334
Lal17g1015 322 Pfam Nucleosome assembly protein (NAP) 134 282 IPR002164 GO:0005634|GO:0006334
Lal17g1015 322 Coils Coil 86 120 - -
Lal17g1015 322 MobiDBLite consensus disorder prediction 274 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g1015 Lal-Chr17 8367853 8374066 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g1015 K11290 - gmx:100793432 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g1913 14 18441056 18447619 Lal17g1015 17 8367853 8374066 ECH
Lal17g1015 17 8367853 8374066 Lal17g1015 17 8367853 8374066 ECH
Lal17g1015 17 8367853 8374066 Lal21g0803 21 7051024 7062466 LSH
Lal17g1015 17 8367853 8374066 Lal14g1913 14 18441056 18447619 PCT
Lal17g1015 17 8367853 8374066 Lal7g1396 7 18935066 18938563 PCT