Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1101 ATGGGAACATTTCATAGCTTCAGAAAAGCCTTAGGAGCTCTCAAAGATTCCACCACTGTAGGCTTAGCCAAGGTCAACAGCGAATACAAGGAATTGGATATTGCAATTGTAAGGGCTACCAGTCATGTTGAATACCCTCCTAAGGAACGTCATGTTAGAAAAATATTGTATGCAACAGCAGCAAACCAGCCACGAGCAGATGTGGCATACAGCATACAGGCACTTTCCAAGAGGCTTTCCAAGACGCGAAGTTGGATAGTGGCTATAAAGACATTGATAGTAATTCACAGGATTTTGAGAGAGGGTGATCCAACATTCATAGAAGACCTTGGAAAGTACTCACACAAGAGACACATTTTCCAAATGTCCAATTTCAAAGATGACTCTAGCCCCGAAGCATGGGTATGTTCTGCATGGGTTAGAAGCTATGCATTATTTTTAGAAGAAAGACTTGAATGCTTTAAAACCCTTGGATATGACATAGAGACTGAGCGTTTAACCAAATCATCACCGGGTTCGACTAAGGCTCACAGCAGAACACGGACGTTGGGTGGTGATGAGCTGTTGGAGCAGCTGCCAGCACTACAGCAACTTCTATACCGCCTTGTCGGTTGTGAGCCTGAAGGATCCTCTAACAGCAATTATCTAATACAGTATGGACTGGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCCCTCAATGATGGAATCATAAATCTTGTGGACATGTTCTTCGAAATGCCGAAACATGAAGCAGTGAAGACTCTACATATTTATAAAAGAGCTCGCCAACAGGCTGAACATCTTGCTGACTTCTATGATTACTGCAAGGGCTTGGATCTTGCAAGGAATTTTCAGTTTCCAATCTTGAGACAGCCACCAATCACTTTTATTGCCACAATGGAAGATTACATTAAAGAAGCACCCCAAACAGGTCATAAAAGAGTGGAATATCAAGAAAAAGATCAATCGCCTCGAAAAGAAGAACCGGAACCAGAAAAGCCTCAAGCAAATGAGACACAAGCCGAAGAAGTACTAGTTGAGGAAGAACCTGTAGAAAAAGAAGAAACACAGCCTAAGGAAGAGGAAGTTGAACCTCCTCCTCTGATATCAACCGATGTAACTTACGATTTGCTGGGTCTAAATGAAATAAATCCGAAAACTCTAGAACTGGAGGAAAGGAATGCTTTAGCACTTGCAATTTTACCAACTGGTGGAAATAATTCAAGCAATCTTGCTTTGACTAACATAAGTGGAACATCTGGTTGGGAACTTGCACTTGTTACAACACCGAGTAACCTTACCAGCCAAGCGCCAGTTCGCAAAATGGCTGGTGGGTTTGACAATCTATTACTAGACAGCTTGTATGAGGATGAAAATGCTAGGAGACAACTTCAACTTCGAAATGCAGGTCATGGATATGAAAGAATGGCAACATATAATACACTCAACCATTGTAATCAGCATGATCCATTTGCAATGTACAACAATATAGCACCTCCACCCAATGTACAAATGGCATTAATGACTCAACAACAGCAACAACTGCAGCAGCAGCAACAAATGATGTTCCAACAACAACAACACAACATGATGATGTTCCCTTACCAGCAATCACATATTCAATACCCTCAACAGACTCAAGTTATTGGTTATTCTAATCCATTTGGAGATCCCTTACCCGTACCTAACCATCCTTATAACTCAATGCCCTATCAAGGGAACTACAATTTACTATAG 1746 0.4135 MGTFHSFRKALGALKDSTTVGLAKVNSEYKELDIAIVRATSHVEYPPKERHVRKILYATAANQPRADVAYSIQALSKRLSKTRSWIVAIKTLIVIHRILREGDPTFIEDLGKYSHKRHIFQMSNFKDDSSPEAWVCSAWVRSYALFLEERLECFKTLGYDIETERLTKSSPGSTKAHSRTRTLGGDELLEQLPALQQLLYRLVGCEPEGSSNSNYLIQYGLALVLKESFKIYCALNDGIINLVDMFFEMPKHEAVKTLHIYKRARQQAEHLADFYDYCKGLDLARNFQFPILRQPPITFIATMEDYIKEAPQTGHKRVEYQEKDQSPRKEEPEPEKPQANETQAEEVLVEEEPVEKEETQPKEEEVEPPPLISTDVTYDLLGLNEINPKTLELEERNALALAILPTGGNNSSNLALTNISGTSGWELALVTTPSNLTSQAPVRKMAGGFDNLLLDSLYEDENARRQLQLRNAGHGYERMATYNTLNHCNQHDPFAMYNNIAPPPNVQMALMTQQQQQLQQQQQMMFQQQQHNMMMFPYQQSHIQYPQQTQVIGYSNPFGDPLPVPNHPYNSMPYQGNYNLL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1101 581 MobiDBLite consensus disorder prediction 311 370 - -
Lal7g1101 581 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 568 IPR045192 GO:0048268|GO:0072583
Lal7g1101 581 SUPERFAMILY ENTH/VHS domain 31 161 IPR008942 -
Lal7g1101 581 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Lal7g1101 581 SUPERFAMILY GAT-like domain 178 309 - -
Lal7g1101 581 MobiDBLite consensus disorder prediction 311 340 - -
Lal7g1101 581 Gene3D ANTH domain 174 325 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lal7g1101 581 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 568 - -
Lal7g1101 581 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Lal7g1101 581 CDD ANTH_N 32 154 - -
Lal7g1101 581 Gene3D - 5 161 IPR008942 -
Lal7g1101 581 MobiDBLite consensus disorder prediction 354 369 - -
Lal7g1101 581 SMART enth_2 30 161 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1101 Lal-Chr7 16994263 16998935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1101 K20044 - gmx:100815975 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1101 7 16994263 16998935 Lal7g1101 7 16994263 16998935 ECH
Lal7g1101 7 16994263 16998935 Lal17g1559 17 17046989 17052363 PCT
Lal7g1101 7 16994263 16998935 Lal4g1564 4 19832406 19834928 PCT
Lal17g1559 17 17046989 17052363 Lal7g1101 7 16994263 16998935 PCT
Lal4g1564 4 19832406 19834928 Lal7g1101 7 16994263 16998935 PCT